Protein–RNA interactions for Protein: I3L3M4

Claudin, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
I3L3M4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
I3L3M4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
I3L3M4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
I3L3M4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
I3L3M4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.88□□□□□ -0.19
I3L3M4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
I3L3M4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.88□□□□□ -0.19
I3L3M4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
I3L3M4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.88□□□□□ -0.19
I3L3M4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.88□□□□□ -0.19
I3L3M4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
I3L3M4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.88□□□□□ -0.19
I3L3M4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
I3L3M4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
I3L3M4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
I3L3M4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
I3L3M4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.87□□□□□ -0.19
I3L3M4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.87□□□□□ -0.19
I3L3M4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
I3L3M4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 MCRIP2P1-201ENST00000394346 511 ntBASIC13.87□□□□□ -0.19
I3L3M4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.87□□□□□ -0.19
I3L3M4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
I3L3M4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.87□□□□□ -0.19
I3L3M4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.87□□□□□ -0.19
I3L3M4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.87□□□□□ -0.19
I3L3M4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
I3L3M4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.87□□□□□ -0.19
I3L3M4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
I3L3M4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.87□□□□□ -0.19
I3L3M4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
I3L3M4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
I3L3M4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.86□□□□□ -0.19
I3L3M4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.86□□□□□ -0.19
I3L3M4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
I3L3M4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.86□□□□□ -0.19
I3L3M4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.86□□□□□ -0.19
I3L3M4 MFSD11-216ENST00000590393 1141 ntBASIC13.86□□□□□ -0.19
I3L3M4 AC100791.3-201ENST00000617619 330 ntBASIC13.86□□□□□ -0.19
I3L3M4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.86□□□□□ -0.19
I3L3M4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
I3L3M4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms