Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 AC131274.2-201ENST00000580697 1507 ntBASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 BOD1-206ENST00000480951 814 ntTSL 2 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 AC018755.3-202ENST00000596210 929 ntBASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CHKB-CPT1BH3BT56 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 REST-210ENST00000638187 1334 ntTSL 5 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 C17orf82-201ENST00000623772 1530 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 AL592295.1-201ENST00000400984 884 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L13-201ENST00000554103 1267 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L15-201ENST00000611059 1267 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L23-201ENST00000615195 1269 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L24-201ENST00000617576 1269 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L22-201ENST00000618238 1269 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L20-201ENST00000619712 1269 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L21-201ENST00000622058 1269 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L10-201ENST00000622460 1267 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L25-201ENST00000624915 1269 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 AC020907.5-201ENST00000624372 1936 ntBASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CHKB-CPT1BH3BT56 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 AL596257.1-201ENST00000641463 2694 ntBASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC10.84□□□□□ -0.67
CHKB-CPT1BH3BT56 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms