Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 AP006587.1-201ENST00000534129 1502 ntBASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA3F8WFD2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA3F8WFD2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA3F8WFD2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA3F8WFD2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA3F8WFD2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA3F8WFD2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA3F8WFD2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA3F8WFD2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 KRT18P21-201ENST00000515767 1272 ntBASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 CR392000.1-201ENST00000624770 1228 ntBASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 AC112907.3-201ENST00000577781 2400 ntBASIC17.76■□□□□ 0.43
NPIPA3F8WFD2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 FAM210CP-201ENST00000445714 574 ntBASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA3F8WFD2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms