Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AC113347.1-201ENST00000413321 391 ntBASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AP005242.2-201ENST00000580065 1175 ntBASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 AL691432.2-201ENST00000607222 2038 ntBASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D3FA6NER0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 FEM1AP1-201ENST00000431297 1995 ntBASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D3FA6NER0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 SLC25A3P1-201ENST00000443844 931 ntBASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 AP000692.2-201ENST00000608391 879 ntBASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D3FA6NER0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 KRT18P57-201ENST00000443599 1254 ntBASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 FAM207BP-201ENST00000447172 505 ntBASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 AL049597.2-201ENST00000565575 961 ntBASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TBC1D3FA6NER0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 LIN28AP1-201ENST00000429574 405 ntBASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 AC008040.2-201ENST00000461049 708 ntBASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 AC128688.1-201ENST00000487626 519 ntBASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 EGLN1P1-201ENST00000531623 762 ntBASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms