Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.77■□□□□ 0.91
RCCD1A6NED2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 TFP1-202ENST00000475455 1573 ntBASIC20.76■□□□□ 0.91
RCCD1A6NED2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 FP475955.4-201ENST00000623131 1990 ntBASIC20.76■□□□□ 0.91
RCCD1A6NED2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RCCD1A6NED2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.76■□□□□ 0.91
RCCD1A6NED2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 AC007322.1-201ENST00000426983 750 ntBASIC20.75■□□□□ 0.91
RCCD1A6NED2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 AC231657.2-201ENST00000624556 255 ntBASIC20.75■□□□□ 0.91
RCCD1A6NED2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.75■□□□□ 0.91
RCCD1A6NED2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RCCD1A6NED2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 AC120498.9-201ENST00000339021 3867 ntBASIC20.74■□□□□ 0.91
RCCD1A6NED2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 AC026471.1-201ENST00000564629 3026 ntBASIC20.74■□□□□ 0.91
RCCD1A6NED2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RCCD1A6NED2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RCCD1A6NED2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 ZNF815P-204ENST00000434898 1737 ntBASIC20.73■□□□□ 0.91
RCCD1A6NED2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 AC005082.1-201ENST00000413042 2259 ntBASIC20.73■□□□□ 0.91
RCCD1A6NED2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.73■□□□□ 0.91
RCCD1A6NED2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RCCD1A6NED2 AL512625.2-201ENST00000417533 625 ntBASIC20.73■□□□□ 0.91
RCCD1A6NED2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.73■□□□□ 0.91
RCCD1A6NED2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.73■□□□□ 0.91
RCCD1A6NED2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RCCD1A6NED2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RCCD1A6NED2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RCCD1A6NED2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms