Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF222A6NCQ9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 FAM21FP-204ENST00000608637 956 ntBASIC15.86■□□□□ 0.13
RNF222A6NCQ9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF222A6NCQ9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF222A6NCQ9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 ESPNP-201ENST00000270691 2015 ntBASIC15.84■□□□□ 0.13
RNF222A6NCQ9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 PTBP1P-201ENST00000554374 1601 ntBASIC15.84■□□□□ 0.13
RNF222A6NCQ9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF222A6NCQ9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RNF222A6NCQ9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
RNF222A6NCQ9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.13
RNF222A6NCQ9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms