Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 FBXW4P1-201ENST00000426721 2239 ntBASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 FEM1AP4-201ENST00000443167 1987 ntBASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 ATP5G2P1-201ENST00000433580 426 ntBASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 ZNF444P1-201ENST00000559497 298 ntBASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 AC006128.1-201ENST00000624704 1661 ntBASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC163A0A0D9SF12 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC163A0A0D9SF12 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 AC007225.1-201ENST00000566331 1836 ntBASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 KRT8P45-201ENST00000414328 1447 ntBASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC163A0A0D9SF12 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC163A0A0D9SF12 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC163A0A0D9SF12 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC163A0A0D9SF12 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC163A0A0D9SF12 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC163A0A0D9SF12 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 AC112907.2-201ENST00000448639 330 ntBASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC163A0A0D9SF12 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 AC083849.1-201ENST00000615227 514 ntBASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 HYMAI.1-201ENST00000620949 238 ntBASIC19.32■□□□□ 0.68
CCDC163A0A0D9SF12 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC163A0A0D9SF12 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms