Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV17A0A0B4J275 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV17A0A0B4J275 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV17A0A0B4J275 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV17A0A0B4J275 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV17A0A0B4J275 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 TSPY17P-201ENST00000450329 467 ntBASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 AL512604.3-201ENST00000569583 964 ntBASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV17A0A0B4J275 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 WWOX-216ENST00000569818 525 ntBASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV17A0A0B4J275 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 AC007663.1-201ENST00000438948 1240 ntBASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 CA15P1-201ENST00000481698 905 ntBASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV17A0A0B4J275 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV17A0A0B4J275 AC092338.2-201ENST00000568827 1415 ntBASIC17.64■□□□□ 0.42
TRAV17A0A0B4J275 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.64■□□□□ 0.42
TRAV17A0A0B4J275 FEM1AP1-201ENST00000431297 1995 ntBASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV17A0A0B4J275 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms