Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.08■■■□□ 2.25
KCNMB3Q9NPA1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
KCNMB3Q9NPA1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.07■■■□□ 2.24
KCNMB3Q9NPA1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
KCNMB3Q9NPA1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
KCNMB3Q9NPA1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
KCNMB3Q9NPA1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
KCNMB3Q9NPA1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 MIR7108-201ENST00000614319 87 ntBASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
KCNMB3Q9NPA1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
KCNMB3Q9NPA1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
KCNMB3Q9NPA1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.04■■■□□ 2.24
KCNMB3Q9NPA1 DUX4L11-201ENST00000611504 1267 ntBASIC29.04■■■□□ 2.24
KCNMB3Q9NPA1 DUX4L12-201ENST00000614593 1267 ntBASIC29.04■■■□□ 2.24
KCNMB3Q9NPA1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.04■■■□□ 2.24
KCNMB3Q9NPA1 DUX4L14-201ENST00000621227 1267 ntBASIC29.04■■■□□ 2.24
KCNMB3Q9NPA1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
KCNMB3Q9NPA1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
KCNMB3Q9NPA1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNMB3Q9NPA1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNMB3Q9NPA1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.02■■■□□ 2.24
KCNMB3Q9NPA1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.02■■■□□ 2.24
KCNMB3Q9NPA1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KCNMB3Q9NPA1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
KCNMB3Q9NPA1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
KCNMB3Q9NPA1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
KCNMB3Q9NPA1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.01■■■□□ 2.23
KCNMB3Q9NPA1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
KCNMB3Q9NPA1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
KCNMB3Q9NPA1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29■■■□□ 2.23
KCNMB3Q9NPA1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29■■■□□ 2.23
KCNMB3Q9NPA1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29■■■□□ 2.23
KCNMB3Q9NPA1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
KCNMB3Q9NPA1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
KCNMB3Q9NPA1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.99■■■□□ 2.23
KCNMB3Q9NPA1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
KCNMB3Q9NPA1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.99■■■□□ 2.23
KCNMB3Q9NPA1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
KCNMB3Q9NPA1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KCNMB3Q9NPA1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KCNMB3Q9NPA1 AC100797.4-201ENST00000631653 1827 ntBASIC28.98■■■□□ 2.23
KCNMB3Q9NPA1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.98■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L13-201ENST00000554103 1267 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L15-201ENST00000611059 1267 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L23-201ENST00000615195 1269 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L24-201ENST00000617576 1269 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L22-201ENST00000618238 1269 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L20-201ENST00000619712 1269 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L21-201ENST00000622058 1269 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L10-201ENST00000622460 1267 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 DUX4L25-201ENST00000624915 1269 ntBASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.97■■■□□ 2.23
KCNMB3Q9NPA1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
KCNMB3Q9NPA1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
KCNMB3Q9NPA1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.96■■■□□ 2.23
KCNMB3Q9NPA1 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.96■■■□□ 2.23
KCNMB3Q9NPA1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.96■■■□□ 2.23
KCNMB3Q9NPA1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
KCNMB3Q9NPA1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
KCNMB3Q9NPA1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.95■■■□□ 2.22
KCNMB3Q9NPA1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
KCNMB3Q9NPA1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.94■■■□□ 2.22
KCNMB3Q9NPA1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.94■■■□□ 2.22
KCNMB3Q9NPA1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.93■■■□□ 2.22
KCNMB3Q9NPA1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
KCNMB3Q9NPA1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
KCNMB3Q9NPA1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
KCNMB3Q9NPA1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.91■■■□□ 2.22
KCNMB3Q9NPA1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
KCNMB3Q9NPA1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.91■■■□□ 2.22
KCNMB3Q9NPA1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
KCNMB3Q9NPA1 CR559946.2-201ENST00000623684 991 ntBASIC28.9■■■□□ 2.22
KCNMB3Q9NPA1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.9■■■□□ 2.22
KCNMB3Q9NPA1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.22
KCNMB3Q9NPA1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.89■■■□□ 2.22
KCNMB3Q9NPA1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.89■■■□□ 2.22
KCNMB3Q9NPA1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
KCNMB3Q9NPA1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
KCNMB3Q9NPA1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
KCNMB3Q9NPA1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 MIR3648-2-201ENST00000581792 180 ntBASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 MIR3648-1-201ENST00000615959 180 ntBASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
KCNMB3Q9NPA1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNMB3Q9NPA1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
KCNMB3Q9NPA1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNMB3Q9NPA1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
KCNMB3Q9NPA1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KCNMB3Q9NPA1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms