Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.75■■□□□ 1.71
CFAP54Q96N23 AC025884.2-201ENST00000553429 711 ntBASIC25.75■■□□□ 1.71
CFAP54Q96N23 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.75■■□□□ 1.71
CFAP54Q96N23 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.75■■□□□ 1.71
CFAP54Q96N23 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CFAP54Q96N23 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP54Q96N23 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.74■■□□□ 1.71
CFAP54Q96N23 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP54Q96N23 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CFAP54Q96N23 AC009299.2-201ENST00000482477 511 ntBASIC25.74■■□□□ 1.71
CFAP54Q96N23 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CFAP54Q96N23 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP54Q96N23 AC092296.2-201ENST00000589470 999 ntBASIC25.72■■□□□ 1.71
CFAP54Q96N23 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.72■■□□□ 1.71
CFAP54Q96N23 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP54Q96N23 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
CFAP54Q96N23 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP54Q96N23 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.7■■□□□ 1.7
CFAP54Q96N23 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP54Q96N23 GUSBP5-201ENST00000418136 578 ntBASIC25.69■■□□□ 1.7
CFAP54Q96N23 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP54Q96N23 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.69■■□□□ 1.7
CFAP54Q96N23 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP54Q96N23 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP54Q96N23 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP54Q96N23 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CFAP54Q96N23 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.66■■□□□ 1.7
CFAP54Q96N23 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFAP54Q96N23 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.65■■□□□ 1.7
CFAP54Q96N23 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CFAP54Q96N23 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CFAP54Q96N23 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.64■■□□□ 1.69
CFAP54Q96N23 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CFAP54Q96N23 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFAP54Q96N23 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP54Q96N23 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.62■■□□□ 1.69
CFAP54Q96N23 AC129492.7-201ENST00000622992 756 ntBASIC25.62■■□□□ 1.69
CFAP54Q96N23 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CFAP54Q96N23 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP54Q96N23 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP54Q96N23 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CFAP54Q96N23 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP54Q96N23 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CFAP54Q96N23 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.6■■□□□ 1.69
CFAP54Q96N23 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.59■■□□□ 1.69
CFAP54Q96N23 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CFAP54Q96N23 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.59■■□□□ 1.69
CFAP54Q96N23 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP54Q96N23 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP54Q96N23 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP54Q96N23 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.58■■□□□ 1.69
CFAP54Q96N23 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP54Q96N23 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP54Q96N23 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.58■■□□□ 1.69
CFAP54Q96N23 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.58■■□□□ 1.69
CFAP54Q96N23 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.58■■□□□ 1.69
CFAP54Q96N23 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP54Q96N23 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP54Q96N23 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP54Q96N23 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CFAP54Q96N23 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.56■■□□□ 1.68
CFAP54Q96N23 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP54Q96N23 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP54Q96N23 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.55■■□□□ 1.68
CFAP54Q96N23 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP54Q96N23 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CFAP54Q96N23 DUX4L18-201ENST00000553347 1267 ntBASIC25.55■■□□□ 1.68
CFAP54Q96N23 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CFAP54Q96N23 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP54Q96N23 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP54Q96N23 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CFAP54Q96N23 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.54■■□□□ 1.68
CFAP54Q96N23 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP54Q96N23 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.53■■□□□ 1.68
CFAP54Q96N23 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CFAP54Q96N23 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP54Q96N23 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CFAP54Q96N23 AL356441.2-201ENST00000443009 864 ntBASIC25.52■■□□□ 1.68
CFAP54Q96N23 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.52■■□□□ 1.68
CFAP54Q96N23 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
CFAP54Q96N23 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.51■■□□□ 1.67
CFAP54Q96N23 LINC00273-201ENST00000539813 1452 ntBASIC25.51■■□□□ 1.67
CFAP54Q96N23 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CFAP54Q96N23 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP54Q96N23 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP54Q96N23 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CFAP54Q96N23 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.5■■□□□ 1.67
CFAP54Q96N23 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CFAP54Q96N23 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.49■■□□□ 1.67
CFAP54Q96N23 RP9P-202ENST00000450133 1212 ntBASIC25.49■■□□□ 1.67
CFAP54Q96N23 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
CFAP54Q96N23 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CFAP54Q96N23 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.48■■□□□ 1.67
CFAP54Q96N23 KRT8P33-201ENST00000508125 1423 ntBASIC25.48■■□□□ 1.67
CFAP54Q96N23 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CFAP54Q96N23 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CFAP54Q96N23 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
CFAP54Q96N23 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.47■■□□□ 1.67
CFAP54Q96N23 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP54Q96N23 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 1181.8 ms