Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.26■□□□□ 0.51
CSMD3Q7Z407 AL161658.1-201ENST00000623641 1967 ntBASIC18.26■□□□□ 0.51
CSMD3Q7Z407 AC004987.1-201ENST00000428627 508 ntBASIC18.25■□□□□ 0.51
CSMD3Q7Z407 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSMD3Q7Z407 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CSMD3Q7Z407 AC092296.2-201ENST00000589470 999 ntBASIC18.25■□□□□ 0.51
CSMD3Q7Z407 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.24■□□□□ 0.51
CSMD3Q7Z407 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSMD3Q7Z407 AL592295.1-201ENST00000400984 884 ntBASIC18.24■□□□□ 0.51
CSMD3Q7Z407 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSMD3Q7Z407 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.23■□□□□ 0.51
CSMD3Q7Z407 AL035685.1-201ENST00000636663 812 ntBASIC18.23■□□□□ 0.51
CSMD3Q7Z407 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CSMD3Q7Z407 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSMD3Q7Z407 AL451085.2-201ENST00000605085 799 ntBASIC18.22■□□□□ 0.51
CSMD3Q7Z407 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD3Q7Z407 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.22■□□□□ 0.51
CSMD3Q7Z407 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSMD3Q7Z407 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CSMD3Q7Z407 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD3Q7Z407 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD3Q7Z407 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.2■□□□□ 0.5
CSMD3Q7Z407 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD3Q7Z407 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.2■□□□□ 0.5
CSMD3Q7Z407 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSMD3Q7Z407 AC120057.4-201ENST00000624722 1615 ntBASIC18.18■□□□□ 0.5
CSMD3Q7Z407 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 AC019069.1-201ENST00000610008 1333 ntBASIC18.18■□□□□ 0.5
CSMD3Q7Z407 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.18■□□□□ 0.5
CSMD3Q7Z407 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 ATP5G2P3-201ENST00000429083 425 ntBASIC18.17■□□□□ 0.5
CSMD3Q7Z407 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.17■□□□□ 0.5
CSMD3Q7Z407 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD3Q7Z407 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD3Q7Z407 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD3Q7Z407 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD3Q7Z407 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD3Q7Z407 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.16■□□□□ 0.5
CSMD3Q7Z407 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD3Q7Z407 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.15■□□□□ 0.5
CSMD3Q7Z407 AC148477.6-201ENST00000623746 465 ntBASIC18.15■□□□□ 0.5
CSMD3Q7Z407 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD3Q7Z407 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD3Q7Z407 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD3Q7Z407 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.14■□□□□ 0.49
CSMD3Q7Z407 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD3Q7Z407 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD3Q7Z407 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CSMD3Q7Z407 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.14■□□□□ 0.49
CSMD3Q7Z407 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.14■□□□□ 0.49
CSMD3Q7Z407 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.13■□□□□ 0.49
CSMD3Q7Z407 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD3Q7Z407 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.13■□□□□ 0.49
CSMD3Q7Z407 WHAMMP2-203ENST00000563942 1603 ntBASIC18.13■□□□□ 0.49
CSMD3Q7Z407 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD3Q7Z407 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CSMD3Q7Z407 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD3Q7Z407 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CSMD3Q7Z407 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD3Q7Z407 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CSMD3Q7Z407 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD3Q7Z407 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.11■□□□□ 0.49
CSMD3Q7Z407 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD3Q7Z407 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CSMD3Q7Z407 AC010864.1-201ENST00000609407 1511 ntBASIC18.1■□□□□ 0.49
CSMD3Q7Z407 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSMD3Q7Z407 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD3Q7Z407 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CSMD3Q7Z407 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.09■□□□□ 0.49
CSMD3Q7Z407 AC135983.2-203ENST00000454486 1613 ntBASIC18.08■□□□□ 0.49
CSMD3Q7Z407 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
CSMD3Q7Z407 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD3Q7Z407 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSMD3Q7Z407 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD3Q7Z407 MIR219A2-201ENST00000608502 1504 ntBASIC18.07■□□□□ 0.48
CSMD3Q7Z407 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.07■□□□□ 0.48
CSMD3Q7Z407 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD3Q7Z407 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD3Q7Z407 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSMD3Q7Z407 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD3Q7Z407 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSMD3Q7Z407 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms