Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.86■■□□□ 1.41
HLA-DQA1Q5Y7H0 LINC01971-201ENST00000617888 1048 ntBASIC23.86■■□□□ 1.41
HLA-DQA1Q5Y7H0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.86■■□□□ 1.41
HLA-DQA1Q5Y7H0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
HLA-DQA1Q5Y7H0 ABCB10P3-201ENST00000561950 2166 ntBASIC23.86■■□□□ 1.41
HLA-DQA1Q5Y7H0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HLA-DQA1Q5Y7H0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HLA-DQA1Q5Y7H0 AC135983.2-203ENST00000454486 1613 ntBASIC23.85■■□□□ 1.41
HLA-DQA1Q5Y7H0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HLA-DQA1Q5Y7H0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HLA-DQA1Q5Y7H0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.83■■□□□ 1.41
HLA-DQA1Q5Y7H0 MIR7108-201ENST00000614319 87 ntBASIC23.83■■□□□ 1.41
HLA-DQA1Q5Y7H0 WHAMMP2-203ENST00000563942 1603 ntBASIC23.82■■□□□ 1.4
HLA-DQA1Q5Y7H0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DQA1Q5Y7H0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.82■■□□□ 1.4
HLA-DQA1Q5Y7H0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DQA1Q5Y7H0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HLA-DQA1Q5Y7H0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.81■■□□□ 1.4
HLA-DQA1Q5Y7H0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DQA1Q5Y7H0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DQA1Q5Y7H0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HLA-DQA1Q5Y7H0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
HLA-DQA1Q5Y7H0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DQA1Q5Y7H0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DQA1Q5Y7H0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DQA1Q5Y7H0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DQA1Q5Y7H0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
HLA-DQA1Q5Y7H0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DQA1Q5Y7H0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 DUX4L11-201ENST00000611504 1267 ntBASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 DUX4L12-201ENST00000614593 1267 ntBASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 DUX4L14-201ENST00000621227 1267 ntBASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 AC139426.1-201ENST00000568218 2529 ntBASIC23.77■■□□□ 1.4
HLA-DQA1Q5Y7H0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
HLA-DQA1Q5Y7H0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.76■■□□□ 1.39
HLA-DQA1Q5Y7H0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
HLA-DQA1Q5Y7H0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.75■■□□□ 1.39
HLA-DQA1Q5Y7H0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DQA1Q5Y7H0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.74■■□□□ 1.39
HLA-DQA1Q5Y7H0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DQA1Q5Y7H0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DQA1Q5Y7H0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.74■■□□□ 1.39
HLA-DQA1Q5Y7H0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DQA1Q5Y7H0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DQA1Q5Y7H0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.73■■□□□ 1.39
HLA-DQA1Q5Y7H0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.73■■□□□ 1.39
HLA-DQA1Q5Y7H0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
HLA-DQA1Q5Y7H0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
HLA-DQA1Q5Y7H0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.72■■□□□ 1.39
HLA-DQA1Q5Y7H0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.72■■□□□ 1.39
HLA-DQA1Q5Y7H0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HLA-DQA1Q5Y7H0 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.72■■□□□ 1.39
HLA-DQA1Q5Y7H0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
HLA-DQA1Q5Y7H0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
HLA-DQA1Q5Y7H0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HLA-DQA1Q5Y7H0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.71■■□□□ 1.39
HLA-DQA1Q5Y7H0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.71■■□□□ 1.39
HLA-DQA1Q5Y7H0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.7■■□□□ 1.39
HLA-DQA1Q5Y7H0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L13-201ENST00000554103 1267 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L15-201ENST00000611059 1267 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L23-201ENST00000615195 1269 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L24-201ENST00000617576 1269 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L22-201ENST00000618238 1269 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L20-201ENST00000619712 1269 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L21-201ENST00000622058 1269 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L10-201ENST00000622460 1267 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 DUX4L25-201ENST00000624915 1269 ntBASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.7■■□□□ 1.38
HLA-DQA1Q5Y7H0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HLA-DQA1Q5Y7H0 AC100797.4-201ENST00000631653 1827 ntBASIC23.68■■□□□ 1.38
HLA-DQA1Q5Y7H0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DQA1Q5Y7H0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DQA1Q5Y7H0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.68■■□□□ 1.38
HLA-DQA1Q5Y7H0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HLA-DQA1Q5Y7H0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DQA1Q5Y7H0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DQA1Q5Y7H0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.67■■□□□ 1.38
HLA-DQA1Q5Y7H0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HLA-DQA1Q5Y7H0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DQA1Q5Y7H0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DQA1Q5Y7H0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DQA1Q5Y7H0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HLA-DQA1Q5Y7H0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms