Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PER3P56645 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PER3P56645 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.52■■□□□ 1.36
PER3P56645 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PER3P56645 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PER3P56645 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PER3P56645 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PER3P56645 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.51■■□□□ 1.35
PER3P56645 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PER3P56645 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
PER3P56645 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.5■■□□□ 1.35
PER3P56645 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PER3P56645 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.5■■□□□ 1.35
PER3P56645 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.5■■□□□ 1.35
PER3P56645 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.5■■□□□ 1.35
PER3P56645 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PER3P56645 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PER3P56645 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.5■■□□□ 1.35
PER3P56645 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PER3P56645 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PER3P56645 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PER3P56645 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PER3P56645 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PER3P56645 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
PER3P56645 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PER3P56645 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.48■■□□□ 1.35
PER3P56645 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PER3P56645 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PER3P56645 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PER3P56645 GPX1-201ENST00000419349 1106 ntBASIC23.47■■□□□ 1.35
PER3P56645 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PER3P56645 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PER3P56645 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PER3P56645 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.46■■□□□ 1.35
PER3P56645 RNF126P1-201ENST00000567452 1320 ntBASIC23.45■■□□□ 1.34
PER3P56645 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PER3P56645 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PER3P56645 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
PER3P56645 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PER3P56645 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.43■■□□□ 1.34
PER3P56645 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PER3P56645 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PER3P56645 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
PER3P56645 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PER3P56645 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PER3P56645 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PER3P56645 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PER3P56645 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
PER3P56645 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PER3P56645 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PER3P56645 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
PER3P56645 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PER3P56645 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PER3P56645 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.38■■□□□ 1.33
PER3P56645 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PER3P56645 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.37■■□□□ 1.33
PER3P56645 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.37■■□□□ 1.33
PER3P56645 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PER3P56645 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PER3P56645 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PER3P56645 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.37■■□□□ 1.33
PER3P56645 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.37■■□□□ 1.33
PER3P56645 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PER3P56645 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PER3P56645 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PER3P56645 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.36■■□□□ 1.33
PER3P56645 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PER3P56645 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PER3P56645 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.35■■□□□ 1.33
PER3P56645 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PER3P56645 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.34■■□□□ 1.33
PER3P56645 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PER3P56645 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PER3P56645 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PER3P56645 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PER3P56645 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.33■■□□□ 1.33
PER3P56645 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PER3P56645 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PER3P56645 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PER3P56645 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.31■■□□□ 1.32
PER3P56645 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PER3P56645 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PER3P56645 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PER3P56645 AC012354.3-201ENST00000623734 483 ntBASIC23.3■■□□□ 1.32
PER3P56645 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PER3P56645 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.3■■□□□ 1.32
PER3P56645 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PER3P56645 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.3■■□□□ 1.32
PER3P56645 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.3■■□□□ 1.32
PER3P56645 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PER3P56645 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PER3P56645 AC010864.1-201ENST00000609407 1511 ntBASIC23.29■■□□□ 1.32
PER3P56645 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.29■■□□□ 1.32
PER3P56645 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PER3P56645 NTF6A-201ENST00000591175 560 ntBASIC23.29■■□□□ 1.32
PER3P56645 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PER3P56645 AC135731.1-201ENST00000569415 2548 ntBASIC23.29■■□□□ 1.32
PER3P56645 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PER3P56645 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PER3P56645 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms