Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YOR300WYOR300W 309 nt7.95□□□□□ -1.14
NDE1P40215 LEU4YNL104C 1860 nt7.95□□□□□ -1.14
NDE1P40215 HTS1YPR033C 1641 nt7.95□□□□□ -1.14
NDE1P40215 GGA2YHR108W 1758 nt7.94□□□□□ -1.14
NDE1P40215 YFR020WYFR020W 699 nt7.94□□□□□ -1.14
NDE1P40215 GPM1YKL152C 744 nt7.94□□□□□ -1.14
NDE1P40215 ERO1YML130C 1692 nt7.94□□□□□ -1.14
NDE1P40215 HAL5YJL165C 2568 nt7.92□□□□□ -1.14
NDE1P40215 YMR316C-BYMR316C-B 309 nt7.91□□□□□ -1.14
NDE1P40215 ATG22YCL038C 1587 nt7.91□□□□□ -1.14
NDE1P40215 THI3YDL080C 1830 nt7.91□□□□□ -1.14
NDE1P40215 ECM10YEL030W 1935 nt7.91□□□□□ -1.14
NDE1P40215 FIT1YDR534C 1587 nt7.9□□□□□ -1.14
NDE1P40215 SWM1YDR260C 513 nt7.89□□□□□ -1.15
NDE1P40215 YGR210CYGR210C 1236 nt7.89□□□□□ -1.15
NDE1P40215 DPH5YLR172C 903 nt7.89□□□□□ -1.15
NDE1P40215 ALR1YOL130W 2580 nt7.89□□□□□ -1.15
NDE1P40215 HBS1YKR084C 1836 nt7.89□□□□□ -1.15
NDE1P40215 FET5YFL041W 1869 nt7.88□□□□□ -1.15
NDE1P40215 TGA1tA(UGC)A 73 nt7.88□□□□□ -1.15
NDE1P40215 tA(UGC)EtA(UGC)E 73 nt7.88□□□□□ -1.15
NDE1P40215 tA(UGC)GtA(UGC)G 73 nt7.88□□□□□ -1.15
NDE1P40215 tA(UGC)LtA(UGC)L 73 nt7.88□□□□□ -1.15
NDE1P40215 tA(UGC)OtA(UGC)O 73 nt7.88□□□□□ -1.15
NDE1P40215 tE(CUC)DtE(CUC)D 72 nt7.88□□□□□ -1.15
NDE1P40215 tE(CUC)ItE(CUC)I 72 nt7.88□□□□□ -1.15
NDE1P40215 YIA6YIL006W 1122 nt7.88□□□□□ -1.15
NDE1P40215 YBL095WYBL095W 813 nt7.88□□□□□ -1.15
NDE1P40215 YLR460CYLR460C 1131 nt7.87□□□□□ -1.15
NDE1P40215 YMR007WYMR007W 381 nt7.87□□□□□ -1.15
NDE1P40215 IDP3YNL009W 1263 nt7.87□□□□□ -1.15
NDE1P40215 FCY1YPR062W 477 nt7.86□□□□□ -1.15
NDE1P40215 YMC2YBR104W 990 nt7.86□□□□□ -1.15
NDE1P40215 LPD1YFL018C 1500 nt7.86□□□□□ -1.15
NDE1P40215 RIB1YBL033C 1038 nt7.85□□□□□ -1.15
NDE1P40215 RCR1YBR005W 642 nt7.85□□□□□ -1.15
NDE1P40215 DAL7YIR031C 1665 nt7.83□□□□□ -1.16
NDE1P40215 SOD2YHR008C 702 nt7.83□□□□□ -1.16
NDE1P40215 YPL108WYPL108W 507 nt7.83□□□□□ -1.16
NDE1P40215 ADE5,7YGL234W 2409 nt7.82□□□□□ -1.16
NDE1P40215 BIM1YER016W 1035 nt7.82□□□□□ -1.16
NDE1P40215 YHC3YJL059W 1227 nt7.82□□□□□ -1.16
NDE1P40215 MRS4YKR052C 915 nt7.82□□□□□ -1.16
NDE1P40215 NPP2YEL016C 1482 nt7.81□□□□□ -1.16
NDE1P40215 CHS7YHR142W 951 nt7.81□□□□□ -1.16
NDE1P40215 YMR166CYMR166C 1107 nt7.81□□□□□ -1.16
NDE1P40215 DUS3YLR401C 2007 nt7.81□□□□□ -1.16
NDE1P40215 TMS1YDR105C 1422 nt7.8□□□□□ -1.16
NDE1P40215 YIR035CYIR035C 765 nt7.8□□□□□ -1.16
NDE1P40215 OLA1YBR025C 1185 nt7.79□□□□□ -1.16
NDE1P40215 LSP1YPL004C 1026 nt7.78□□□□□ -1.16
NDE1P40215 FAF1YIL019W 1041 nt7.77□□□□□ -1.17
NDE1P40215 YJR149WYJR149W 1215 nt7.77□□□□□ -1.17
NDE1P40215 POP2YNR052C 1302 nt7.77□□□□□ -1.17
NDE1P40215 AAT1YKL106W 1356 nt7.76□□□□□ -1.17
NDE1P40215 YJL009WYJL009W 327 nt7.76□□□□□ -1.17
NDE1P40215 ERG6YML008C 1152 nt7.76□□□□□ -1.17
NDE1P40215 MET22YOL064C 1074 nt7.76□□□□□ -1.17
NDE1P40215 ORT1YOR130C 879 nt7.76□□□□□ -1.17
NDE1P40215 CAK1YFL029C 1107 nt7.75□□□□□ -1.17
NDE1P40215 BUB2YMR055C 921 nt7.75□□□□□ -1.17
NDE1P40215 snR4snR4 186 nt7.75□□□□□ -1.17
NDE1P40215 OCH1YGL038C 1443 nt7.75□□□□□ -1.17
NDE1P40215 YEN1YER041W 2280 nt7.75□□□□□ -1.17
NDE1P40215 RRT14YIL127C 621 nt7.74□□□□□ -1.17
NDE1P40215 CIR2YOR356W 1896 nt7.74□□□□□ -1.17
NDE1P40215 TRP2YER090W 1524 nt7.73□□□□□ -1.17
NDE1P40215 YRF1-3YGR296W 5580 nt7.73□□□□□ -1.17
NDE1P40215 YRF1-6YNL339C 5580 nt7.73□□□□□ -1.17
NDE1P40215 YRF1-7YPL283C 5580 nt7.73□□□□□ -1.17
NDE1P40215 SMC5YOL034W 3282 nt7.73□□□□□ -1.17
NDE1P40215 CRN1YLR429W 1956 nt7.73□□□□□ -1.17
NDE1P40215 YJL160CYJL160C 864 nt7.72□□□□□ -1.17
NDE1P40215 PDC6YGR087C 1692 nt7.72□□□□□ -1.17
NDE1P40215 COG1YGL223C 1254 nt7.71□□□□□ -1.18
NDE1P40215 GFA1YKL104C 2154 nt7.71□□□□□ -1.18
NDE1P40215 RBS1YDL189W 1374 nt7.71□□□□□ -1.18
NDE1P40215 CIT3YPR001W 1461 nt7.7□□□□□ -1.18
NDE1P40215 HXT11YOL156W 1704 nt7.7□□□□□ -1.18
NDE1P40215 ADE16YLR028C 1776 nt7.7□□□□□ -1.18
NDE1P40215 EHD3YDR036C 1503 nt7.7□□□□□ -1.18
NDE1P40215 RNA170RNA170 169 nt7.7□□□□□ -1.18
NDE1P40215 RMA1YKL132C 1293 nt7.69□□□□□ -1.18
NDE1P40215 YMR210WYMR210W 1350 nt7.69□□□□□ -1.18
NDE1P40215 YBR056WYBR056W 1506 nt7.68□□□□□ -1.18
NDE1P40215 snR86snR86 1004 nt7.68□□□□□ -1.18
NDE1P40215 EMC3YKL207W 762 nt7.68□□□□□ -1.18
NDE1P40215 YNL190WYNL190W 615 nt7.67□□□□□ -1.18
NDE1P40215 MET30YIL046W 1923 nt7.67□□□□□ -1.18
NDE1P40215 YIL177CYIL177C 5277 nt7.67□□□□□ -1.18
NDE1P40215 PET18YCR020C 648 nt7.66□□□□□ -1.18
NDE1P40215 YPT31YER031C 672 nt7.66□□□□□ -1.18
NDE1P40215 SRM1YGL097W 1449 nt7.66□□□□□ -1.18
NDE1P40215 SHO1YER118C 1104 nt7.65□□□□□ -1.18
NDE1P40215 MFT1YML062C 1179 nt7.65□□□□□ -1.18
NDE1P40215 YPR084WYPR084W 1371 nt7.65□□□□□ -1.18
NDE1P40215 RHO1YPR165W 630 nt7.65□□□□□ -1.18
NDE1P40215 MEP1YGR121C 1479 nt7.64□□□□□ -1.19
NDE1P40215 YER152W-AYER152W-A 567 nt7.64□□□□□ -1.19
NDE1P40215 PFS2YNL317W 1398 nt7.63□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms