Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 GPN2YOR262W 1044 nt6.34□□□□□ -1.39
CDC43P18898 CDC13YDL220C 2775 nt6.34□□□□□ -1.4
CDC43P18898 AI3Q0060 1248 nt6.33□□□□□ -1.4
CDC43P18898 YDR467CYDR467C 327 nt6.33□□□□□ -1.4
CDC43P18898 YLR311CYLR311C 348 nt6.33□□□□□ -1.4
CDC43P18898 MIX17YMR002W 471 nt6.32□□□□□ -1.4
CDC43P18898 ERR3YMR323W 1314 nt6.31□□□□□ -1.4
CDC43P18898 ERR1YOR393W 1314 nt6.31□□□□□ -1.4
CDC43P18898 ERR2YPL281C 1314 nt6.31□□□□□ -1.4
CDC43P18898 CSM1YCR086W 573 nt6.31□□□□□ -1.4
CDC43P18898 RAI1YGL246C 1164 nt6.31□□□□□ -1.4
CDC43P18898 EMC3YKL207W 762 nt6.31□□□□□ -1.4
CDC43P18898 ASP3-1YLR155C 1089 nt6.31□□□□□ -1.4
CDC43P18898 ASP3-2YLR157C 1089 nt6.31□□□□□ -1.4
CDC43P18898 ASP3-3YLR158C 1089 nt6.31□□□□□ -1.4
CDC43P18898 ASP3-4YLR160C 1089 nt6.31□□□□□ -1.4
CDC43P18898 PEX12YMR026C 1200 nt6.31□□□□□ -1.4
CDC43P18898 PRE2YPR103W 864 nt6.31□□□□□ -1.4
CDC43P18898 MAS2YHR024C 1449 nt6.31□□□□□ -1.4
CDC43P18898 YIL092WYIL092W 1902 nt6.31□□□□□ -1.4
CDC43P18898 YNL040WYNL040W 1371 nt6.31□□□□□ -1.4
CDC43P18898 NUP57YGR119C 1626 nt6.3□□□□□ -1.4
CDC43P18898 BUD31YCR063W 474 nt6.3□□□□□ -1.4
CDC43P18898 SPE4YLR146C 903 nt6.3□□□□□ -1.4
CDC43P18898 YMR253CYMR253C 1245 nt6.3□□□□□ -1.4
CDC43P18898 MSB3YNL293W 1902 nt6.29□□□□□ -1.4
CDC43P18898 TIP1YBR067C 633 nt6.29□□□□□ -1.4
CDC43P18898 MSB4YOL112W 1479 nt6.28□□□□□ -1.4
CDC43P18898 SOL2YCR073W-A 948 nt6.28□□□□□ -1.4
CDC43P18898 AQR1YNL065W 1761 nt6.28□□□□□ -1.4
CDC43P18898 NEM1YHR004C 1341 nt6.27□□□□□ -1.41
CDC43P18898 HXT13YEL069C 1695 nt6.27□□□□□ -1.41
CDC43P18898 tR(UCU)Q1tR(UCU)Q1 73 nt6.27□□□□□ -1.41
CDC43P18898 RAS2YNL098C 969 nt6.27□□□□□ -1.41
CDC43P18898 AAT1YKL106W 1356 nt6.27□□□□□ -1.41
CDC43P18898 YGR012WYGR012W 1182 nt6.26□□□□□ -1.41
CDC43P18898 NUC1YJL208C 990 nt6.26□□□□□ -1.41
CDC43P18898 ARC19YKL013C 516 nt6.26□□□□□ -1.41
CDC43P18898 STD1YOR047C 1335 nt6.25□□□□□ -1.41
CDC43P18898 HXT9YJL219W 1704 nt6.25□□□□□ -1.41
CDC43P18898 LOT5YKL183W 921 nt6.25□□□□□ -1.41
CDC43P18898 SED5YLR026C 1023 nt6.25□□□□□ -1.41
CDC43P18898 ERG6YML008C 1152 nt6.25□□□□□ -1.41
CDC43P18898 YNR048WYNR048W 1182 nt6.25□□□□□ -1.41
CDC43P18898 GND1YHR183W 1470 nt6.25□□□□□ -1.41
CDC43P18898 SVF1YDR346C 1446 nt6.25□□□□□ -1.41
CDC43P18898 SAM50YNL026W 1455 nt6.24□□□□□ -1.41
CDC43P18898 CDS1YBR029C 1374 nt6.24□□□□□ -1.41
CDC43P18898 YBL095WYBL095W 813 nt6.24□□□□□ -1.41
CDC43P18898 YOL079WYOL079W 399 nt6.24□□□□□ -1.41
CDC43P18898 EAF3YPR023C 1206 nt6.24□□□□□ -1.41
CDC43P18898 YEL023CYEL023C 2049 nt6.24□□□□□ -1.41
CDC43P18898 ISR1YPR106W 1332 nt6.24□□□□□ -1.41
CDC43P18898 YEL034C-AYEL034C-A 603 nt6.23□□□□□ -1.41
CDC43P18898 YAL016C-BYAL016C-B 186 nt6.23□□□□□ -1.41
CDC43P18898 ELO1YJL196C 933 nt6.23□□□□□ -1.41
CDC43P18898 MGM101YJR144W 810 nt6.23□□□□□ -1.41
CDC43P18898 UBC12YLR306W 567 nt6.23□□□□□ -1.41
CDC43P18898 TIF34YMR146C 1044 nt6.23□□□□□ -1.41
CDC43P18898 LEA1YPL213W 717 nt6.23□□□□□ -1.41
CDC43P18898 YPL222C-AYPL222C-A 246 nt6.23□□□□□ -1.41
CDC43P18898 snR34snR34 203 nt6.23□□□□□ -1.41
CDC43P18898 YER152CYER152C 1332 nt6.23□□□□□ -1.41
CDC43P18898 FCP1YMR277W 2199 nt6.23□□□□□ -1.41
CDC43P18898 YDR455CYDR455C 309 nt6.22□□□□□ -1.41
CDC43P18898 YPL264CYPL264C 1062 nt6.22□□□□□ -1.41
CDC43P18898 SAC7YDR389W 1965 nt6.22□□□□□ -1.41
CDC43P18898 SAM3YPL274W 1764 nt6.21□□□□□ -1.41
CDC43P18898 ATG23YLR431C 1362 nt6.21□□□□□ -1.41
CDC43P18898 OYE2YHR179W 1203 nt6.21□□□□□ -1.42
CDC43P18898 RRT8YOL048C 1029 nt6.21□□□□□ -1.42
CDC43P18898 VPS28YPL065W 729 nt6.21□□□□□ -1.42
CDC43P18898 RPT5YOR117W 1305 nt6.21□□□□□ -1.42
CDC43P18898 ABP1YCR088W 1779 nt6.21□□□□□ -1.42
CDC43P18898 YMR265CYMR265C 1386 nt6.2□□□□□ -1.42
CDC43P18898 YBL111CYBL111C 2004 nt6.2□□□□□ -1.42
CDC43P18898 TVP23YDR084C 600 nt6.2□□□□□ -1.42
CDC43P18898 RAD23YEL037C 1197 nt6.2□□□□□ -1.42
CDC43P18898 PRY1YJL079C 900 nt6.2□□□□□ -1.42
CDC43P18898 GPM1YKL152C 744 nt6.2□□□□□ -1.42
CDC43P18898 YMR074CYMR074C 438 nt6.2□□□□□ -1.42
CDC43P18898 SPC24YMR117C 642 nt6.2□□□□□ -1.42
CDC43P18898 REV7YIL139C 738 nt6.19□□□□□ -1.42
CDC43P18898 RUF21RUF21 707 nt6.19□□□□□ -1.42
CDC43P18898 CBK1YNL161W 2271 nt6.19□□□□□ -1.42
CDC43P18898 POB3YML069W 1659 nt6.18□□□□□ -1.42
CDC43P18898 ERG13YML126C 1476 nt6.18□□□□□ -1.42
CDC43P18898 ISY1YJR050W 708 nt6.18□□□□□ -1.42
CDC43P18898 ORM1YGR038W 669 nt6.17□□□□□ -1.42
CDC43P18898 COX3Q0275 810 nt6.17□□□□□ -1.42
CDC43P18898 YLR283WYLR283W 945 nt6.17□□□□□ -1.42
CDC43P18898 TAF11YML015C 1041 nt6.17□□□□□ -1.42
CDC43P18898 DIA1YMR316W 1011 nt6.17□□□□□ -1.42
CDC43P18898 SLD7YOR060C 774 nt6.17□□□□□ -1.42
CDC43P18898 KTR3YBR205W 1215 nt6.17□□□□□ -1.42
CDC43P18898 YKR023WYKR023W 1593 nt6.16□□□□□ -1.42
CDC43P18898 STF1YDL130W-A 261 nt6.16□□□□□ -1.42
CDC43P18898 YDL157CYDL157C 357 nt6.16□□□□□ -1.42
CDC43P18898 AVO2YMR068W 1281 nt6.16□□□□□ -1.42
CDC43P18898 SMM1YNR015W 1155 nt6.16□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms