Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH17O14917 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDH17O14917 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDH17O14917 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH17O14917 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH17O14917 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH17O14917 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH17O14917 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDH17O14917 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDH17O14917 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
PCDH17O14917 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH17O14917 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH17O14917 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PCDH17O14917 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH17O14917 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH17O14917 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH17O14917 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PCDH17O14917 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH17O14917 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH17O14917 LINC00273-201ENST00000539813 1452 ntBASIC24.36■■□□□ 1.49
PCDH17O14917 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PCDH17O14917 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PCDH17O14917 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH17O14917 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH17O14917 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PCDH17O14917 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH17O14917 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH17O14917 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH17O14917 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH17O14917 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH17O14917 MIR3648-2-201ENST00000581792 180 ntBASIC24.34■■□□□ 1.49
PCDH17O14917 MIR3648-1-201ENST00000615959 180 ntBASIC24.34■■□□□ 1.49
PCDH17O14917 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH17O14917 MIR639-201ENST00000384974 98 ntBASIC24.33■■□□□ 1.49
PCDH17O14917 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH17O14917 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH17O14917 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH17O14917 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH17O14917 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH17O14917 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH17O14917 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.32■■□□□ 1.48
PCDH17O14917 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH17O14917 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH17O14917 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDH17O14917 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH17O14917 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L13-201ENST00000554103 1267 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L15-201ENST00000611059 1267 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L23-201ENST00000615195 1269 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L24-201ENST00000617576 1269 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L22-201ENST00000618238 1269 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L20-201ENST00000619712 1269 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L21-201ENST00000622058 1269 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L10-201ENST00000622460 1267 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 DUX4L25-201ENST00000624915 1269 ntBASIC24.31■■□□□ 1.48
PCDH17O14917 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH17O14917 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH17O14917 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH17O14917 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH17O14917 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH17O14917 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH17O14917 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH17O14917 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH17O14917 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH17O14917 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH17O14917 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDH17O14917 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH17O14917 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH17O14917 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH17O14917 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH17O14917 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH17O14917 CR559946.2-201ENST00000623684 991 ntBASIC24.26■■□□□ 1.47
PCDH17O14917 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH17O14917 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PCDH17O14917 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH17O14917 MIR4449-201ENST00000578365 66 ntBASIC24.25■■□□□ 1.47
PCDH17O14917 AC016575.1-201ENST00000607026 382 ntBASIC24.25■■□□□ 1.47
PCDH17O14917 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH17O14917 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH17O14917 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH17O14917 AC142086.6-201ENST00000621154 1765 ntBASIC24.24■■□□□ 1.47
PCDH17O14917 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PCDH17O14917 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH17O14917 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH17O14917 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH17O14917 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH17O14917 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH17O14917 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDH17O14917 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH17O14917 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH17O14917 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH17O14917 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH17O14917 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.22■■□□□ 1.47
PCDH17O14917 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH17O14917 AL139393.2-201ENST00000608721 2025 ntBASIC24.22■■□□□ 1.47
PCDH17O14917 AC127502.1-201ENST00000399971 1502 ntBASIC24.21■■□□□ 1.47
PCDH17O14917 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDH17O14917 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDH17O14917 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms