Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC33A1O00400 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SLC33A1O00400 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC33A1O00400 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC33A1O00400 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC33A1O00400 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC33A1O00400 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC33A1O00400 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SLC33A1O00400 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC33A1O00400 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC33A1O00400 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC33A1O00400 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.64■■□□□ 1.06
SLC33A1O00400 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.64■■□□□ 1.06
SLC33A1O00400 DUX4L28-201ENST00000623687 678 ntBASIC21.64■■□□□ 1.05
SLC33A1O00400 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC33A1O00400 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC33A1O00400 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC33A1O00400 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.63■■□□□ 1.05
SLC33A1O00400 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC33A1O00400 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC33A1O00400 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC33A1O00400 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC33A1O00400 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC33A1O00400 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC33A1O00400 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SLC33A1O00400 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC33A1O00400 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SLC33A1O00400 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC33A1O00400 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC33A1O00400 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC33A1O00400 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC33A1O00400 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC33A1O00400 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
SLC33A1O00400 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SLC33A1O00400 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC33A1O00400 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC33A1O00400 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC33A1O00400 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SLC33A1O00400 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC33A1O00400 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC33A1O00400 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC33A1O00400 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC33A1O00400 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC33A1O00400 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC33A1O00400 MIR3665-201ENST00000578708 105 ntBASIC21.59■■□□□ 1.05
SLC33A1O00400 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC33A1O00400 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC33A1O00400 AC108673.1-201ENST00000510422 1159 ntBASIC21.58■■□□□ 1.05
SLC33A1O00400 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC33A1O00400 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SLC33A1O00400 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC33A1O00400 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC33A1O00400 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.57■■□□□ 1.04
SLC33A1O00400 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC33A1O00400 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC33A1O00400 AP006261.1-201ENST00000584783 668 ntBASIC21.56■■□□□ 1.04
SLC33A1O00400 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC33A1O00400 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC33A1O00400 MIR6090-201ENST00000622481 60 ntBASIC21.55■■□□□ 1.04
SLC33A1O00400 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SLC33A1O00400 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SLC33A1O00400 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC33A1O00400 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC33A1O00400 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC33A1O00400 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC33A1O00400 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC33A1O00400 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC33A1O00400 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC33A1O00400 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC33A1O00400 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC33A1O00400 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.52■■□□□ 1.04
SLC33A1O00400 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC33A1O00400 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC33A1O00400 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC33A1O00400 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC33A1O00400 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC33A1O00400 AC100797.4-201ENST00000631653 1827 ntBASIC21.5■■□□□ 1.03
SLC33A1O00400 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC33A1O00400 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SLC33A1O00400 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC33A1O00400 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC33A1O00400 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC33A1O00400 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC33A1O00400 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC33A1O00400 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC33A1O00400 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC33A1O00400 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC33A1O00400 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC33A1O00400 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC33A1O00400 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC33A1O00400 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC33A1O00400 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC33A1O00400 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC33A1O00400 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC33A1O00400 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SLC33A1O00400 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC33A1O00400 AL162393.1-201ENST00000437852 946 ntBASIC21.46■■□□□ 1.03
SLC33A1O00400 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC33A1O00400 AC087741.3-201ENST00000624270 1347 ntBASIC21.46■■□□□ 1.03
SLC33A1O00400 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms