Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
SPDYE4A6NLX3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE4A6NLX3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE4A6NLX3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE4A6NLX3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SPDYE4A6NLX3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPDYE4A6NLX3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.35■■■□□ 2.13
SPDYE4A6NLX3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC28.35■■■□□ 2.13
SPDYE4A6NLX3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
SPDYE4A6NLX3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPDYE4A6NLX3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPDYE4A6NLX3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
SPDYE4A6NLX3 MIR4449-201ENST00000578365 66 ntBASIC28.34■■■□□ 2.13
SPDYE4A6NLX3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.34■■■□□ 2.13
SPDYE4A6NLX3 MIR639-201ENST00000384974 98 ntBASIC28.33■■■□□ 2.13
SPDYE4A6NLX3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPDYE4A6NLX3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 AC120057.4-201ENST00000624722 1615 ntBASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPDYE4A6NLX3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
SPDYE4A6NLX3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.31■■■□□ 2.12
SPDYE4A6NLX3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPDYE4A6NLX3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPDYE4A6NLX3 AL121749.1-202ENST00000609313 2153 ntBASIC28.3■■■□□ 2.12
SPDYE4A6NLX3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
SPDYE4A6NLX3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPDYE4A6NLX3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.3■■■□□ 2.12
SPDYE4A6NLX3 AC016575.1-201ENST00000607026 382 ntBASIC28.3■■■□□ 2.12
SPDYE4A6NLX3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.29■■■□□ 2.12
SPDYE4A6NLX3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.29■■■□□ 2.12
SPDYE4A6NLX3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.29■■■□□ 2.12
SPDYE4A6NLX3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.28■■■□□ 2.12
SPDYE4A6NLX3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPDYE4A6NLX3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPDYE4A6NLX3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPDYE4A6NLX3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE4A6NLX3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE4A6NLX3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE4A6NLX3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SPDYE4A6NLX3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.12
SPDYE4A6NLX3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SPDYE4A6NLX3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.26■■■□□ 2.11
SPDYE4A6NLX3 MIR3648-2-201ENST00000581792 180 ntBASIC28.26■■■□□ 2.11
SPDYE4A6NLX3 MIR3648-1-201ENST00000615959 180 ntBASIC28.26■■■□□ 2.11
SPDYE4A6NLX3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.26■■■□□ 2.11
SPDYE4A6NLX3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SPDYE4A6NLX3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPDYE4A6NLX3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPDYE4A6NLX3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SPDYE4A6NLX3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPDYE4A6NLX3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPDYE4A6NLX3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 DUX4L11-201ENST00000611504 1267 ntBASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 DUX4L12-201ENST00000614593 1267 ntBASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 LINC01971-201ENST00000617888 1048 ntBASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 DUX4L14-201ENST00000621227 1267 ntBASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPDYE4A6NLX3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.22■■■□□ 2.11
SPDYE4A6NLX3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SPDYE4A6NLX3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SPDYE4A6NLX3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.22■■■□□ 2.11
SPDYE4A6NLX3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
SPDYE4A6NLX3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SPDYE4A6NLX3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SPDYE4A6NLX3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPDYE4A6NLX3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SPDYE4A6NLX3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.21■■■□□ 2.11
SPDYE4A6NLX3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
SPDYE4A6NLX3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SPDYE4A6NLX3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
SPDYE4A6NLX3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SPDYE4A6NLX3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
SPDYE4A6NLX3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SPDYE4A6NLX3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
SPDYE4A6NLX3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
SPDYE4A6NLX3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.18■■■□□ 2.1
SPDYE4A6NLX3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SPDYE4A6NLX3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.18■■■□□ 2.1
SPDYE4A6NLX3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPDYE4A6NLX3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPDYE4A6NLX3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SPDYE4A6NLX3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SPDYE4A6NLX3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
SPDYE4A6NLX3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
SPDYE4A6NLX3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SPDYE4A6NLX3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
SPDYE4A6NLX3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SPDYE4A6NLX3 CR559946.2-201ENST00000623684 991 ntBASIC28.14■■■□□ 2.1
SPDYE4A6NLX3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SPDYE4A6NLX3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SPDYE4A6NLX3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
SPDYE4A6NLX3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SPDYE4A6NLX3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SPDYE4A6NLX3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SPDYE4A6NLX3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms