Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TMEM88BA6NKF7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TMEM88BA6NKF7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TMEM88BA6NKF7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TMEM88BA6NKF7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TMEM88BA6NKF7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
TMEM88BA6NKF7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TMEM88BA6NKF7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TMEM88BA6NKF7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.81■■■□□ 2.52
TMEM88BA6NKF7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TMEM88BA6NKF7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.81■■■□□ 2.52
TMEM88BA6NKF7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TMEM88BA6NKF7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TMEM88BA6NKF7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TMEM88BA6NKF7 AC092296.2-201ENST00000589470 999 ntBASIC30.79■■■□□ 2.52
TMEM88BA6NKF7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
TMEM88BA6NKF7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
TMEM88BA6NKF7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.78■■■□□ 2.52
TMEM88BA6NKF7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.77■■■□□ 2.52
TMEM88BA6NKF7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.77■■■□□ 2.52
TMEM88BA6NKF7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.77■■■□□ 2.52
TMEM88BA6NKF7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
TMEM88BA6NKF7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.76■■■□□ 2.51
TMEM88BA6NKF7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TMEM88BA6NKF7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
TMEM88BA6NKF7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TMEM88BA6NKF7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
TMEM88BA6NKF7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TMEM88BA6NKF7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.74■■■□□ 2.51
TMEM88BA6NKF7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TMEM88BA6NKF7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
TMEM88BA6NKF7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TMEM88BA6NKF7 ECEL1P2-201ENST00000461596 1295 ntBASIC30.73■■■□□ 2.51
TMEM88BA6NKF7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
TMEM88BA6NKF7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.73■■■□□ 2.51
TMEM88BA6NKF7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.73■■■□□ 2.51
TMEM88BA6NKF7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
TMEM88BA6NKF7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
TMEM88BA6NKF7 AC148477.6-201ENST00000623746 465 ntBASIC30.71■■■□□ 2.51
TMEM88BA6NKF7 DUX4L18-201ENST00000553347 1267 ntBASIC30.7■■■□□ 2.51
TMEM88BA6NKF7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.7■■■□□ 2.51
TMEM88BA6NKF7 AC131212.1-201ENST00000613771 668 ntBASIC30.7■■■□□ 2.51
TMEM88BA6NKF7 AC129492.7-201ENST00000622992 756 ntBASIC30.7■■■□□ 2.51
TMEM88BA6NKF7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TMEM88BA6NKF7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
TMEM88BA6NKF7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TMEM88BA6NKF7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TMEM88BA6NKF7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
TMEM88BA6NKF7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.67■■■□□ 2.5
TMEM88BA6NKF7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.66■■■□□ 2.5
TMEM88BA6NKF7 MIR935-201ENST00000401179 91 ntBASIC30.66■■■□□ 2.5
TMEM88BA6NKF7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TMEM88BA6NKF7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.66■■■□□ 2.5
TMEM88BA6NKF7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TMEM88BA6NKF7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TMEM88BA6NKF7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC30.64■■■□□ 2.5
TMEM88BA6NKF7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
TMEM88BA6NKF7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
TMEM88BA6NKF7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TMEM88BA6NKF7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
TMEM88BA6NKF7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TMEM88BA6NKF7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
TMEM88BA6NKF7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.62■■■□□ 2.49
TMEM88BA6NKF7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
TMEM88BA6NKF7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TMEM88BA6NKF7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TMEM88BA6NKF7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TMEM88BA6NKF7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TMEM88BA6NKF7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
TMEM88BA6NKF7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TMEM88BA6NKF7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TMEM88BA6NKF7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
TMEM88BA6NKF7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.57■■■□□ 2.48
TMEM88BA6NKF7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.56■■■□□ 2.48
TMEM88BA6NKF7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
TMEM88BA6NKF7 THA1P-201ENST00000590384 1145 ntBASIC30.56■■■□□ 2.48
TMEM88BA6NKF7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TMEM88BA6NKF7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
TMEM88BA6NKF7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TMEM88BA6NKF7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
TMEM88BA6NKF7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.55■■■□□ 2.48
TMEM88BA6NKF7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TMEM88BA6NKF7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.54■■■□□ 2.48
TMEM88BA6NKF7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TMEM88BA6NKF7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
TMEM88BA6NKF7 AL592293.1-201ENST00000502889 1188 ntBASIC30.52■■■□□ 2.48
TMEM88BA6NKF7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TMEM88BA6NKF7 MIR219A2-201ENST00000608502 1504 ntBASIC30.52■■■□□ 2.48
TMEM88BA6NKF7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TMEM88BA6NKF7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
TMEM88BA6NKF7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TMEM88BA6NKF7 AC009299.2-201ENST00000482477 511 ntBASIC30.51■■■□□ 2.47
TMEM88BA6NKF7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.51■■■□□ 2.47
TMEM88BA6NKF7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TMEM88BA6NKF7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TMEM88BA6NKF7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TMEM88BA6NKF7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
TMEM88BA6NKF7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.48■■■□□ 2.47
TMEM88BA6NKF7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TMEM88BA6NKF7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms