Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 LARP7P4-201ENST00000481075 878 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC005412.2-201ENST00000492004 341 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 TPT1P3-201ENST00000492841 512 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 RN7SKP253-201ENST00000516424 309 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC023825.1-201ENST00000566704 1030 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AP000919.1-202ENST00000581139 1264 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC004223.2-201ENST00000590309 544 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 ELOCP35-201ENST00000604289 336 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AP002802.2-201ENST00000605877 235 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC005021.1-201ENST00000608730 355 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC138965.3-201ENST00000623875 498 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.9□□□□□ -1.47
SSX2IPQ9Y2D8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SSX2IPQ9Y2D8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SSX2IPQ9Y2D8 Z95331.1-201ENST00000623075 23112 ntBASIC5.9□□□□□ -1.47
SSX2IPQ9Y2D8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSX2IPQ9Y2D8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.9□□□□□ -1.47
SSX2IPQ9Y2D8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 MIR765-201ENST00000390226 114 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 RPL22P22-201ENST00000395439 379 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SKP273-201ENST00000411392 314 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 MTND2P16-201ENST00000419987 799 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC093655.2-201ENST00000425735 631 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC092634.2-201ENST00000428146 1010 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC005033.1-201ENST00000428904 813 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 TMEM183AP1-205ENST00000432739 290 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC138761.5-201ENST00000433967 325 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC044797.1-201ENST00000445744 679 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AL596266.1-201ENST00000448132 400 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 EXOSC3P1-201ENST00000448649 500 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SL222P-201ENST00000476452 299 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 RPSAP50-201ENST00000481955 852 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ATP5LP5-201ENST00000483050 299 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 SUMO1P1-201ENST00000497904 306 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 NDUFA5P12-201ENST00000503796 343 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 HMGB1P40-201ENST00000525121 540 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC006927.2-201ENST00000639256 389 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 SAMMSON-213ENST00000641336 1521 ntBASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX2IPQ9Y2D8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC007382.1-201ENST00000624376 2618 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms