Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 GCSHP4-201ENST00000538792 439 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AC008033.2-201ENST00000542626 177 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AL390334.1-201ENST00000556395 450 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 SNORD39.2-201ENST00000579995 76 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AC020910.3-201ENST00000603701 874 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AL159169.2-201ENST00000610061 1269 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 NF1P10-201ENST00000613227 742 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 AC090510.2-201ENST00000617465 629 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 INTS6P1-201ENST00000504674 2530 ntBASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.45□□□□□ -1.54
CCSER1Q9C0I3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 SAMMSON-213ENST00000641336 1521 ntBASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 SLC25A18P1-201ENST00000449385 454 ntBASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 OR8A2P-201ENST00000528631 952 ntBASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AC012414.7-202ENST00000622705 1090 ntBASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 AL031595.2-201ENST00000624215 19071 ntBASIC5.44□□□□□ -1.54
CCSER1Q9C0I3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 RNA5SP123-201ENST00000363244 119 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MIR550A3-201ENST00000390735 95 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AP000580.1-201ENST00000404439 358 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 RNA5SP296-201ENST00000410523 111 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 LINC00993-201ENST00000420453 540 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 RPS17P8-201ENST00000434525 335 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 NMNAT1P2-201ENST00000435192 860 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 RBMY2TP-201ENST00000451162 947 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 RPL7P61-201ENST00000451721 751 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MORF4L1P3-201ENST00000525966 950 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AP001922.4-201ENST00000526967 290 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 BNIP3P32-201ENST00000600015 554 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MIR8069-1-201ENST00000616627 86 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 MIR8069-2-201ENST00000621412 86 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 AC133552.1-201ENST00000569988 4007 ntBASIC5.43□□□□□ -1.54
CCSER1Q9C0I3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms