Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
NPAS4Q8IUM7 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 Y_RNA.517-201ENST00000384551 106 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 RNY3P10-201ENST00000384764 102 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 MIR541-201ENST00000401360 84 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 RPS24P1-201ENST00000438550 371 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 OR6C5P-201ENST00000452388 923 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC027673.1-201ENST00000456245 405 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC005229.2-201ENST00000456995 399 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC021074.2-201ENST00000468434 172 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 RPL7P51-201ENST00000490532 749 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC004069.2-201ENST00000505438 1114 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 HMGB1P28-201ENST00000507778 552 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 RPL7L1P13-201ENST00000511702 739 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 PRMT5P1-201ENST00000514351 598 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC116347.2-201ENST00000514912 523 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 RNU6-1178P-201ENST00000516674 107 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 TRAV15-201ENST00000556680 249 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC092332.1-201ENST00000563684 829 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL136363.2-201ENST00000604173 851 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 LARP7P1-201ENST00000605576 316 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC010678.1-201ENST00000614118 713 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 OR1N1-202ENST00000619659 939 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC025048.6-202ENST00000627667 438 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL139384.2-201ENST00000613809 3590 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 AL136984.1-201ENST00000607611 1893 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 CASC19-228ENST00000641414 1684 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 HSPA8P17-201ENST00000427029 1382 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 ZNF37BP-203ENST00000452306 1352 ntBASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS4Q8IUM7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 AC110597.1-201ENST00000562669 3176 ntBASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
NPAS4Q8IUM7 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms