Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 GAPDHP42-201ENST00000406848 981 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 RN7SKP229-201ENST00000410465 302 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 SNORA79B-201ENST00000410557 148 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 RPL35AP24-201ENST00000413846 330 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC007161.1-204ENST00000423039 460 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 MTND1P4-201ENST00000435196 415 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 RPS23P9-201ENST00000448848 438 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 OR52J1P-201ENST00000450596 932 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 RPS3AP43-201ENST00000479743 781 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 UBA52P7-201ENST00000486088 380 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 RN7SL547P-201ENST00000490793 290 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 EIF3LP3-201ENST00000495197 822 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 OR5H3P-201ENST00000502817 919 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 RPL7L1P4-201ENST00000513004 707 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 MRPS33P3-201ENST00000513456 322 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 GAPDHP62-201ENST00000515313 990 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 RNU6-491P-201ENST00000516099 110 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 NRBF2P4-201ENST00000520874 850 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AP000926.4-201ENST00000527351 454 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXG1P55316 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXG1P55316 MIR4489-201ENST00000578869 62 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AP005403.1-201ENST00000579720 229 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 BNIP3P30-201ENST00000601184 574 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 OR7M1P-201ENST00000608946 533 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC093673.2-201ENST00000609674 331 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AL360219.1-201ENST00000610230 366 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXG1P55316 AC131159.1-201ENST00000621854 213 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 AL603839.4-201ENST00000624658 1005 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC005609.4-201ENST00000625071 447 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.88□□□□□ -1.63
FOXG1P55316 HSPD1P7-201ENST00000447985 1686 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC104446.1-201ENST00000613728 1321 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 AC004076.2-201ENST00000620532 3323 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXG1P55316 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
FOXG1P55316 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXG1P55316 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
FOXG1P55316 ZNF876P-202ENST00000398732 1485 ntBASIC4.88□□□□□ -1.63
FOXG1P55316 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
FOXG1P55316 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.87□□□□□ -1.63
FOXG1P55316 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXG1P55316 MT-RNR2-201ENST00000387347 1559 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXG1P55316 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXG1P55316 AL355834.1-201ENST00000556602 3965 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 AL353796.1-201ENST00000561542 3241 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
FOXG1P55316 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXG1P55316 AC234772.1-201ENST00000377927 937 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 HMGB3P19-201ENST00000403971 560 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 AL356320.2-201ENST00000417263 507 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 VN1R31P-201ENST00000417498 730 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 HSFY3P-201ENST00000444242 1191 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXG1P55316 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXG1P55316 PTGES3P5-201ENST00000455109 434 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 AC008379.1-201ENST00000463655 464 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 RPS26P39-201ENST00000469206 341 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 OR9N1P-202ENST00000494289 481 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 RPS17P5-201ENST00000498293 408 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 AC090638.1-201ENST00000498296 909 ntBASIC4.87□□□□□ -1.63
FOXG1P55316 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXG1P55316 AC010374.1-201ENST00000503762 1237 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms