Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPS23P1-201ENST00000491662 432 ntBASIC4.72□□□□□ -1.65
HCN1O60741 NDUFB5P1-201ENST00000508134 564 ntBASIC4.72□□□□□ -1.65
HCN1O60741 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.72□□□□□ -1.65
HCN1O60741 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.72□□□□□ -1.65
HCN1O60741 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.72□□□□□ -1.65
HCN1O60741 OR5D15P-201ENST00000531671 942 ntBASIC4.72□□□□□ -1.65
HCN1O60741 AP002373.2-201ENST00000541631 1060 ntBASIC4.72□□□□□ -1.65
HCN1O60741 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCN1O60741 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.72□□□□□ -1.65
HCN1O60741 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.72□□□□□ -1.65
HCN1O60741 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.72□□□□□ -1.65
HCN1O60741 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.72□□□□□ -1.65
HCN1O60741 AC090510.2-201ENST00000617465 629 ntBASIC4.72□□□□□ -1.65
HCN1O60741 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.72□□□□□ -1.65
HCN1O60741 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.72□□□□□ -1.65
HCN1O60741 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCN1O60741 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCN1O60741 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HCN1O60741 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCN1O60741 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCN1O60741 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.72□□□□□ -1.65
HCN1O60741 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HCN1O60741 AC073429.2-201ENST00000569694 1444 ntBASIC4.72□□□□□ -1.65
HCN1O60741 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.65
HCN1O60741 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.71□□□□□ -1.65
HCN1O60741 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HCN1O60741 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.71□□□□□ -1.65
HCN1O60741 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.71□□□□□ -1.66
HCN1O60741 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HCN1O60741 SNURFL-201ENST00000309296 343 ntBASIC4.71□□□□□ -1.66
HCN1O60741 RNU4-4P-201ENST00000364588 130 ntBASIC4.71□□□□□ -1.66
HCN1O60741 RNA5SP90-201ENST00000364801 99 ntBASIC4.71□□□□□ -1.66
HCN1O60741 MIR550A3-201ENST00000390735 95 ntBASIC4.71□□□□□ -1.66
HCN1O60741 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 AL035079.1-201ENST00000405210 287 ntBASIC4.71□□□□□ -1.66
HCN1O60741 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HCN1O60741 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN1O60741 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN1O60741 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN1O60741 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN1O60741 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN1O60741 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN1O60741 RPL35AP21-201ENST00000437667 333 ntBASIC4.71□□□□□ -1.66
HCN1O60741 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN1O60741 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN1O60741 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.71□□□□□ -1.66
HCN1O60741 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
HCN1O60741 AC108161.1-201ENST00000461060 402 ntBASIC4.71□□□□□ -1.66
HCN1O60741 AC073358.1-201ENST00000505671 684 ntBASIC4.71□□□□□ -1.66
HCN1O60741 AC004980.4-201ENST00000513375 203 ntBASIC4.71□□□□□ -1.66
HCN1O60741 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.71□□□□□ -1.66
HCN1O60741 RN7SKP147-201ENST00000517154 244 ntBASIC4.71□□□□□ -1.66
HCN1O60741 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 AC107918.3-201ENST00000533272 382 ntBASIC4.71□□□□□ -1.66
HCN1O60741 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN1O60741 SULT1C2P2-201ENST00000562517 294 ntBASIC4.71□□□□□ -1.66
HCN1O60741 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.71□□□□□ -1.66
HCN1O60741 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 AC009303.3-201ENST00000591103 736 ntBASIC4.71□□□□□ -1.66
HCN1O60741 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN1O60741 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 AC108359.1-201ENST00000616451 1211 ntBASIC4.71□□□□□ -1.66
HCN1O60741 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN1O60741 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 VPS35P1-201ENST00000563400 1518 ntBASIC4.71□□□□□ -1.66
HCN1O60741 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN1O60741 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN1O60741 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 AC126323.6-202ENST00000568092 3511 ntBASIC4.7□□□□□ -1.66
HCN1O60741 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.7□□□□□ -1.66
HCN1O60741 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 Y_RNA.62-201ENST00000362840 99 ntBASIC4.7□□□□□ -1.66
HCN1O60741 RN7SKP224-201ENST00000364140 325 ntBASIC4.7□□□□□ -1.66
HCN1O60741 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN1O60741 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HCN1O60741 RPL5P19-201ENST00000404228 893 ntBASIC4.7□□□□□ -1.66
HCN1O60741 RN7SKP16-201ENST00000410180 299 ntBASIC4.7□□□□□ -1.66
HCN1O60741 CASKP1-201ENST00000412870 582 ntBASIC4.7□□□□□ -1.66
HCN1O60741 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.7□□□□□ -1.66
HCN1O60741 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN1O60741 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.7□□□□□ -1.66
HCN1O60741 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms