Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A1Q8WWI5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 OR55B1P-203ENST00000641518 2602 ntBASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 AC083843.2-201ENST00000568248 6253 ntBASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SLC44A1Q8WWI5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL121776.1-201ENST00000429337 372 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 RPL34P6-201ENST00000432390 345 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 RPS29P10-201ENST00000439197 166 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 ARAFP2-201ENST00000440565 559 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC091180.1-201ENST00000462104 372 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC020779.1-201ENST00000478757 796 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 RPL7P6-201ENST00000480903 738 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC092902.1-201ENST00000486999 259 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 EIF1P7-201ENST00000487533 337 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 RN7SL441P-201ENST00000492388 296 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL136038.1-201ENST00000497246 351 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 HMGB1P3-201ENST00000502802 616 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 RNU6-1102P-201ENST00000516149 96 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 RNA5SP303-201ENST00000516192 130 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 SCARNA21.2-201ENST00000516600 166 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC012400.1-201ENST00000518452 381 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 HMGB1P46-201ENST00000520062 610 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL512310.9-201ENST00000553311 948 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC093510.2-201ENST00000562820 896 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC015911.5-201ENST00000587076 451 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AL589674.2-201ENST00000604304 337 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC104695.2-201ENST00000605056 775 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC005021.1-201ENST00000608730 355 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC245389.2-201ENST00000616023 576 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC242843.1-201ENST00000618702 573 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC015722.2-201ENST00000622210 551 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 AC008079.2-201ENST00000623543 20396 ntBASIC5.15□□□□□ -1.59
SLC44A1Q8WWI5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 RNA5SP339-201ENST00000390987 122 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 OR13Z1P-201ENST00000416141 834 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 PTP4A1P1-201ENST00000420539 515 ntBASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.14□□□□□ -1.59
SLC44A1Q8WWI5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms