Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC132825.8-201ENST00000640783 297 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 AC109780.1-201ENST00000451768 1344 ntBASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC65Q8IXS2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC099654.2-201ENST00000433031 1980 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 RNA5SP345-201ENST00000410646 108 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 GTF2IP5-201ENST00000414608 731 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 RPL7P11-201ENST00000437586 658 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC090686.1-201ENST00000481577 749 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AP000919.1-201ENST00000582850 985 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC010424.2-201ENST00000607594 443 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC016769.4-201ENST00000616893 535 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC012414.7-202ENST00000622705 1090 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AC091905.4-201ENST00000623432 202 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 AL672167.1-204ENST00000641875 3017 ntBASIC5.42□□□□□ -1.54
CCDC65Q8IXS2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AC000374.1-201ENST00000434698 1745 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 RN7SKP95-201ENST00000362860 303 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 CHEK2P3-201ENST00000416118 248 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 PTP4A1P1-201ENST00000420539 515 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 RPL7AP6-201ENST00000477943 801 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 RNA5SP303-201ENST00000516192 130 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 HMGB1P19-201ENST00000517578 577 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 OR7E18P-201ENST00000592589 702 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 MAPK10-349ENST00000641767 3661 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 MTCO1P22-201ENST00000604619 1360 ntBASIC5.41□□□□□ -1.54
CCDC65Q8IXS2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 MAPK10-286ENST00000641208 8747 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 DPPA2P3-201ENST00000411853 655 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 OR2AH1P-201ENST00000425717 928 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 RBMY2QP-201ENST00000429799 1147 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 SLC25A18P1-201ENST00000449385 454 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 snoU13.20-201ENST00000459180 104 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 RPL23AP56-201ENST00000460778 453 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 RNU6-709P-201ENST00000517257 104 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 AL049839.1-201ENST00000556151 657 ntBASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC65Q8IXS2 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms