Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC008147.3-201ENST00000548666 354 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 MIR4502-201ENST00000580432 81 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 UBE2V2P2-201ENST00000587677 504 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC027243.2-201ENST00000602530 724 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC020910.2-201ENST00000603635 610 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 AL352984.2-202ENST00000613699 155 ntBASIC6.8□□□□□ -1.32
RNF43Q68DV7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF43Q68DV7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF43Q68DV7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 RNU6-697P-201ENST00000363348 107 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 RNU4-91P-201ENST00000364778 135 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 RNA5SP485-201ENST00000365053 119 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 RNU6-253P-201ENST00000384730 105 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 USP9YP9-201ENST00000429406 715 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 ATP5F1P1-201ENST00000433775 569 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC007679.3-201ENST00000434035 414 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 GDI2P2-201ENST00000445131 608 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC093664.1-201ENST00000511779 289 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 RN7SKP298-201ENST00000515950 94 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 RNA5SP441-201ENST00000516809 88 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 IGKV3D-34-201ENST00000522638 302 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL390816.3-201ENST00000604527 1066 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL136097.3-201ENST00000611097 505 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 TCL6_3.1-201ENST00000619064 137 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 AL354718.1-201ENST00000619764 589 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 HSPD1P8-201ENST00000400121 1658 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 TTC39DP-201ENST00000416781 1688 ntBASIC6.79□□□□□ -1.32
RNF43Q68DV7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF43Q68DV7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF43Q68DV7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC125238.2-201ENST00000430003 1440 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 MIR365B-201ENST00000362317 111 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 RN7SKP226-201ENST00000364912 300 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 RPL5P20-201ENST00000403848 896 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AL589994.1-201ENST00000404962 340 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms