Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR1F12-201ENST00000402365 945 ntBASIC5.29□□□□□ -1.56
LHX1P48742 AL139128.1-201ENST00000413921 941 ntBASIC5.29□□□□□ -1.56
LHX1P48742 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.29□□□□□ -1.56
LHX1P48742 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 AC104837.2-201ENST00000427236 424 ntBASIC5.29□□□□□ -1.56
LHX1P48742 AC006466.1-201ENST00000438721 289 ntBASIC5.29□□□□□ -1.56
LHX1P48742 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 ENPP7P11-201ENST00000505915 627 ntBASIC5.29□□□□□ -1.56
LHX1P48742 ASNSP4-201ENST00000511103 447 ntBASIC5.29□□□□□ -1.56
LHX1P48742 RNU6-491P-201ENST00000516099 110 ntBASIC5.29□□□□□ -1.56
LHX1P48742 RN7SKP34-201ENST00000516142 244 ntBASIC5.29□□□□□ -1.56
LHX1P48742 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.29□□□□□ -1.56
LHX1P48742 GCSHP4-201ENST00000538792 439 ntBASIC5.29□□□□□ -1.56
LHX1P48742 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.29□□□□□ -1.56
LHX1P48742 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.29□□□□□ -1.56
LHX1P48742 AC004948.1-201ENST00000609858 672 ntBASIC5.29□□□□□ -1.56
LHX1P48742 AP001784.1-201ENST00000624107 428 ntBASIC5.29□□□□□ -1.56
LHX1P48742 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.29□□□□□ -1.56
LHX1P48742 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.29□□□□□ -1.56
LHX1P48742 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LHX1P48742 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
LHX1P48742 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LHX1P48742 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LHX1P48742 MAPK10-338ENST00000641647 3362 ntBASIC5.28□□□□□ -1.56
LHX1P48742 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
LHX1P48742 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.28□□□□□ -1.56
LHX1P48742 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.28□□□□□ -1.56
LHX1P48742 GLUD1P9-201ENST00000420997 1173 ntBASIC5.28□□□□□ -1.56
LHX1P48742 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.28□□□□□ -1.56
LHX1P48742 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.28□□□□□ -1.56
LHX1P48742 CYCSP24-201ENST00000445119 316 ntBASIC5.28□□□□□ -1.56
LHX1P48742 CCRL1P1-201ENST00000449542 1053 ntBASIC5.28□□□□□ -1.56
LHX1P48742 AL691482.1-201ENST00000453255 87 ntBASIC5.28□□□□□ -1.56
LHX1P48742 RPL35AP28-201ENST00000459730 331 ntBASIC5.28□□□□□ -1.56
LHX1P48742 AC092324.1-201ENST00000468671 324 ntBASIC5.28□□□□□ -1.56
LHX1P48742 NIFKP7-201ENST00000503365 834 ntBASIC5.28□□□□□ -1.56
LHX1P48742 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 AC026688.1-201ENST00000520639 1168 ntBASIC5.28□□□□□ -1.56
LHX1P48742 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.28□□□□□ -1.56
LHX1P48742 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 AC092868.3-201ENST00000560515 784 ntBASIC5.28□□□□□ -1.56
LHX1P48742 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.28□□□□□ -1.56
LHX1P48742 AC009117.1-201ENST00000563948 554 ntBASIC5.28□□□□□ -1.56
LHX1P48742 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 Mico1.1-201ENST00000611698 204 ntBASIC5.28□□□□□ -1.56
LHX1P48742 RMST_5.1-201ENST00000618704 126 ntBASIC5.28□□□□□ -1.56
LHX1P48742 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
LHX1P48742 AC019206.1-201ENST00000621938 425 ntBASIC5.28□□□□□ -1.56
LHX1P48742 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 MAPK10-263ENST00000641052 4307 ntBASIC5.28□□□□□ -1.56
LHX1P48742 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
LHX1P48742 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.28□□□□□ -1.56
LHX1P48742 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LHX1P48742 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LHX1P48742 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LHX1P48742 AC010132.2-201ENST00000295493 1043 ntBASIC5.27□□□□□ -1.57
LHX1P48742 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 RN7SKP103-201ENST00000363848 320 ntBASIC5.27□□□□□ -1.57
LHX1P48742 SNORA27.3-201ENST00000364937 134 ntBASIC5.27□□□□□ -1.57
LHX1P48742 SNORA5.1-201ENST00000384275 131 ntBASIC5.27□□□□□ -1.57
LHX1P48742 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LHX1P48742 GTF2IP5-201ENST00000414608 731 ntBASIC5.27□□□□□ -1.57
LHX1P48742 VTI1BP4-201ENST00000427516 527 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AC007559.1-201ENST00000428736 355 ntBASIC5.27□□□□□ -1.57
LHX1P48742 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LHX1P48742 RPL7AP61-201ENST00000443410 636 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.27□□□□□ -1.57
LHX1P48742 SLC25A18P1-201ENST00000449385 454 ntBASIC5.27□□□□□ -1.57
LHX1P48742 OR52J1P-201ENST00000450596 932 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.27□□□□□ -1.57
LHX1P48742 RPS17P2-201ENST00000461663 408 ntBASIC5.27□□□□□ -1.57
LHX1P48742 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.27□□□□□ -1.57
LHX1P48742 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.27□□□□□ -1.57
LHX1P48742 COL6A4P2-205ENST00000509855 506 ntBASIC5.27□□□□□ -1.57
LHX1P48742 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.27□□□□□ -1.57
LHX1P48742 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms