Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC12P31275 AC011352.2-201ENST00000514574 1016 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC12P31275 RNY4P37-201ENST00000516225 96 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 AC011853.1-201ENST00000518911 454 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 AC004217.3-201ENST00000551552 878 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 PSMB7P1-201ENST00000556349 514 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC12P31275 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 AL137072.1-201ENST00000603444 466 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 AL157899.1-201ENST00000604110 936 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
HOXC12P31275 AC026368.1-201ENST00000614934 690 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 AC012414.7-202ENST00000622705 1090 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 AC073592.6-201ENST00000624271 415 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC12P31275 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC12P31275 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
HOXC12P31275 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HOXC12P31275 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HOXC12P31275 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HOXC12P31275 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC12P31275 AC119674.1-204ENST00000641348 1343 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC12P31275 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC12P31275 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC12P31275 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC12P31275 PABPC1P9-201ENST00000426076 1612 ntBASIC5.96□□□□□ -1.46
HOXC12P31275 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC12P31275 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC12P31275 ZNF806-201ENST00000438300 1774 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 AL079343.1-201ENST00000572358 1771 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 RPL11P4-201ENST00000332269 436 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 RNU5F-7P-201ENST00000363696 115 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 RNU1-55P-201ENST00000365510 158 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 AC005522.1-201ENST00000395416 346 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 MTND4LP17-201ENST00000414607 293 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC12P31275 AL139158.1-201ENST00000424719 340 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC12P31275 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC12P31275 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC12P31275 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 RPL7AP71-201ENST00000451120 739 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC119744.1-201ENST00000454746 1715 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 RPL30P9-201ENST00000465586 330 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AL161747.1-201ENST00000480068 358 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 RPL7AP23-201ENST00000482625 776 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC106822.1-201ENST00000502647 526 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.95□□□□□ -1.46
HOXC12P31275 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC12P31275 AC091849.1-201ENST00000509920 121 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC108471.1-201ENST00000513977 287 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 MTCO1P30-201ENST00000515244 580 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 FABP5P5-201ENST00000515537 406 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 AC008802.1-201ENST00000519121 791 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.95□□□□□ -1.46
HOXC12P31275 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.95□□□□□ -1.46
HOXC12P31275 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.95□□□□□ -1.46
HOXC12P31275 RN7SL230P-201ENST00000580835 303 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC009237.13-201ENST00000603193 276 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC009237.12-201ENST00000604755 742 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AL590032.1-201ENST00000604920 252 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC068726.1-201ENST00000610993 341 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC013476.2-201ENST00000614456 459 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC010333.3-201ENST00000615100 402 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 MIR6071-201ENST00000616741 78 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 uc_338.9-201ENST00000617424 182 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC138932.5-201ENST00000617759 563 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AC092650.2-201ENST00000619984 902 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 AL121936.2-201ENST00000641935 662 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms