Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 TXNP2-201ENST00000443918 295 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 EIF2S2P2-201ENST00000447161 982 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AL162591.2-201ENST00000449634 317 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AC090142.1-201ENST00000465776 462 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AC013356.1-201ENST00000489027 564 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
HMGA1P17096 MIR4277-201ENST00000578298 84 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AC069061.3-201ENST00000582254 823 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 MIR4697-201ENST00000582977 78 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 AL133338.2-201ENST00000604292 736 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 AC115286.1-201ENST00000604298 434 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 AL356218.2-201ENST00000605264 187 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 OR8G7P-201ENST00000616658 848 ntBASIC4.88□□□□□ -1.63
HMGA1P17096 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HMGA1P17096 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGA1P17096 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGA1P17096 AL034370.1-201ENST00000397254 1590 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
HMGA1P17096 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
HMGA1P17096 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGA1P17096 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AC008549.2-201ENST00000333482 706 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 RPL32P3-201ENST00000359025 275 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 RNA5SP187-201ENST00000384400 119 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AL592293.2-201ENST00000422292 996 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGA1P17096 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGA1P17096 SCARNA10-201ENST00000459255 330 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AC026979.1-201ENST00000492525 396 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AC025164.1-201ENST00000496249 478 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGA1P17096 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.87□□□□□ -1.63
HMGA1P17096 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGA1P17096 CYCSP40-201ENST00000575927 294 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AL121873.1-201ENST00000616013 524 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AL359757.1-201ENST00000623176 255 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGA1P17096 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGA1P17096 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 RAD17P1-201ENST00000418130 2042 ntBASIC4.87□□□□□ -1.63
HMGA1P17096 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGA1P17096 AC125257.1-201ENST00000560400 2930 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGA1P17096 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 MIR659-201ENST00000384963 97 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGA1P17096 TMBIM7P-201ENST00000418074 855 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGA1P17096 CHIAP3-201ENST00000423668 1133 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 EIF4HP2-201ENST00000424380 563 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 MRPS21P2-201ENST00000424704 264 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 BX119904.3-201ENST00000428194 957 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGA1P17096 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGA1P17096 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 MTND2P28-201ENST00000457540 1044 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 RPS23P7-201ENST00000466210 444 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AC104763.1-201ENST00000475274 360 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 CR383656.1-201ENST00000484916 377 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGA1P17096 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGA1P17096 AC087477.6-201ENST00000559595 843 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AC005191.1-201ENST00000603950 358 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AL445423.1-201ENST00000609941 536 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AC011815.3-201ENST00000624194 473 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HMGA1P17096 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HMGA1P17096 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.86□□□□□ -1.63
HMGA1P17096 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 MTCO1P15-201ENST00000529569 1526 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AC120338.1-201ENST00000625074 1541 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 AP000641.1-201ENST00000531988 1639 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 AC100778.3-201ENST00000580060 1750 ntBASIC4.86□□□□□ -1.63
HMGA1P17096 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGA1P17096 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.85□□□□□ -1.63
HMGA1P17096 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMGA1P17096 AC112198.2-201ENST00000426589 6996 ntBASIC4.85□□□□□ -1.63
HMGA1P17096 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGA1P17096 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms