Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MYCNP04198 AC100756.3-201ENST00000618455 1816 ntBASIC9.95□□□□□ -0.82
MYCNP04198 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
MYCNP04198 AC107081.3-201ENST00000612715 2034 ntBASIC9.95□□□□□ -0.82
MYCNP04198 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
MYCNP04198 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MYCNP04198 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
MYCNP04198 AL121768.1-201ENST00000613917 2544 ntBASIC9.95□□□□□ -0.82
MYCNP04198 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MYCNP04198 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
MYCNP04198 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
MYCNP04198 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MYCNP04198 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
MYCNP04198 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MYCNP04198 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MYCNP04198 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
MYCNP04198 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
MYCNP04198 AMMECR1LP1-201ENST00000415152 841 ntBASIC9.94□□□□□ -0.82
MYCNP04198 AC011753.4-201ENST00000417974 311 ntBASIC9.94□□□□□ -0.82
MYCNP04198 DUTP4-201ENST00000424782 475 ntBASIC9.94□□□□□ -0.82
MYCNP04198 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
MYCNP04198 RPSAP53-201ENST00000433498 862 ntBASIC9.94□□□□□ -0.82
MYCNP04198 RPS7P3-201ENST00000443360 580 ntBASIC9.94□□□□□ -0.82
MYCNP04198 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC9.94□□□□□ -0.82
MYCNP04198 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC9.94□□□□□ -0.82
MYCNP04198 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 AP001992.1-205ENST00000462248 379 ntBASIC9.94□□□□□ -0.82
MYCNP04198 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC9.94□□□□□ -0.82
MYCNP04198 AKIRIN2P1-201ENST00000505898 352 ntBASIC9.94□□□□□ -0.82
MYCNP04198 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC9.94□□□□□ -0.82
MYCNP04198 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC9.94□□□□□ -0.82
MYCNP04198 AC026111.1-201ENST00000551090 1195 ntBASIC9.94□□□□□ -0.82
MYCNP04198 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC9.94□□□□□ -0.82
MYCNP04198 AC138761.2-201ENST00000583878 343 ntBASIC9.94□□□□□ -0.82
MYCNP04198 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC9.94□□□□□ -0.82
MYCNP04198 AC093227.2-201ENST00000589357 285 ntBASIC9.94□□□□□ -0.82
MYCNP04198 U2.14-201ENST00000615943 113 ntBASIC9.94□□□□□ -0.82
MYCNP04198 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 PAPPA-AS1-201ENST00000445861 2450 ntBASIC9.94□□□□□ -0.82
MYCNP04198 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MYCNP04198 AP002833.3-201ENST00000625075 2265 ntBASIC9.94□□□□□ -0.82
MYCNP04198 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC9.94□□□□□ -0.82
MYCNP04198 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MYCNP04198 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.93□□□□□ -0.82
MYCNP04198 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC9.93□□□□□ -0.82
MYCNP04198 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.93□□□□□ -0.82
MYCNP04198 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC9.93□□□□□ -0.82
MYCNP04198 CREM-208ENST00000361599 2170 ntTSL 5 BASIC9.93□□□□□ -0.82
MYCNP04198 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 RNY1P16-201ENST00000363063 111 ntBASIC9.93□□□□□ -0.82
MYCNP04198 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC9.93□□□□□ -0.82
MYCNP04198 RNA5SP178-201ENST00000410380 128 ntBASIC9.93□□□□□ -0.82
MYCNP04198 RNU6-130P-201ENST00000411112 103 ntBASIC9.93□□□□□ -0.82
MYCNP04198 SYF2P2-201ENST00000417620 583 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
MYCNP04198 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC9.93□□□□□ -0.82
MYCNP04198 CFL1P7-201ENST00000424759 486 ntBASIC9.93□□□□□ -0.82
MYCNP04198 UBE2V1P4-201ENST00000425374 344 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC9.93□□□□□ -0.82
MYCNP04198 AC093106.2-201ENST00000428212 385 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AC092162.1-201ENST00000432828 434 ntBASIC9.93□□□□□ -0.82
MYCNP04198 ACTBP12-201ENST00000435871 418 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AL512882.1-201ENST00000436086 832 ntBASIC9.93□□□□□ -0.82
MYCNP04198 CFL1P8-201ENST00000436148 475 ntBASIC9.93□□□□□ -0.82
MYCNP04198 RN7SL598P-201ENST00000494391 294 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC9.93□□□□□ -0.82
MYCNP04198 RACK1-211ENST00000504726 388 ntTSL 5 BASIC9.93□□□□□ -0.82
MYCNP04198 AC092436.3-201ENST00000511788 257 ntBASIC9.93□□□□□ -0.82
MYCNP04198 RNU6-798P-201ENST00000516912 103 ntBASIC9.93□□□□□ -0.82
MYCNP04198 Y_RNA.713-201ENST00000517013 96 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AF186190.1-201ENST00000517470 480 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AC091144.2-201ENST00000521717 433 ntBASIC9.93□□□□□ -0.82
MYCNP04198 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC9.93□□□□□ -0.82
MYCNP04198 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MYCNP04198 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC9.93□□□□□ -0.82
MYCNP04198 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms