Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR6809-201ENST00000612189 116 ntBASIC6.85□□□□□ -1.31
SOX1O00570 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SOX1O00570 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SOX1O00570 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.85□□□□□ -1.31
SOX1O00570 AC007993.1-201ENST00000621298 2430 ntBASIC6.85□□□□□ -1.31
SOX1O00570 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SOX1O00570 NBPF8-201ENST00000583271 5330 ntBASIC6.84□□□□□ -1.31
SOX1O00570 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX1O00570 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.84□□□□□ -1.31
SOX1O00570 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX1O00570 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX1O00570 MIR141-201ENST00000384975 95 ntBASIC6.84□□□□□ -1.31
SOX1O00570 SNORD65.1-201ENST00000390889 71 ntBASIC6.84□□□□□ -1.31
SOX1O00570 RPL24P7-201ENST00000399435 453 ntBASIC6.84□□□□□ -1.31
SOX1O00570 RN7SKP59-201ENST00000410520 314 ntBASIC6.84□□□□□ -1.31
SOX1O00570 PTP4A1P1-201ENST00000420539 515 ntBASIC6.84□□□□□ -1.31
SOX1O00570 BX284632.2-201ENST00000421091 399 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AL139413.1-201ENST00000421309 217 ntBASIC6.84□□□□□ -1.31
SOX1O00570 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.84□□□□□ -1.31
SOX1O00570 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX1O00570 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 AC002504.1-201ENST00000438281 691 ntBASIC6.84□□□□□ -1.31
SOX1O00570 UBE2V1P3-201ENST00000439651 417 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX1O00570 AL512605.1-202ENST00000441919 381 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX1O00570 AL359955.2-201ENST00000445380 353 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 BZW1P1-201ENST00000454901 1240 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC011225.1-201ENST00000457751 369 ntBASIC6.84□□□□□ -1.31
SOX1O00570 RPS4XP12-201ENST00000461747 709 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC146507.1-201ENST00000468335 354 ntBASIC6.84□□□□□ -1.31
SOX1O00570 MTND6P6-201ENST00000478031 263 ntBASIC6.84□□□□□ -1.31
SOX1O00570 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 GAPDHP39-201ENST00000481866 979 ntBASIC6.84□□□□□ -1.31
SOX1O00570 RN7SL184P-201ENST00000488308 297 ntBASIC6.84□□□□□ -1.31
SOX1O00570 MTND6P8-201ENST00000503471 522 ntBASIC6.84□□□□□ -1.31
SOX1O00570 MTCO2P30-201ENST00000503662 364 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 AC025465.4-201ENST00000513422 638 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 SNORA20.3-201ENST00000516880 132 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 AP005597.2-201ENST00000526238 341 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AP000648.1-201ENST00000529682 397 ntBASIC6.84□□□□□ -1.31
SOX1O00570 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX1O00570 RAB11AP2-201ENST00000545905 639 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX1O00570 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 GTF2IP22-201ENST00000554443 182 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.84□□□□□ -1.31
SOX1O00570 AC006960.3-201ENST00000561845 705 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.84□□□□□ -1.31
SOX1O00570 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 AP000907.4-201ENST00000604143 237 ntBASIC6.84□□□□□ -1.31
SOX1O00570 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX1O00570 AL445670.1-201ENST00000618889 801 ntBASIC6.84□□□□□ -1.31
SOX1O00570 TSHZ2-205ENST00000626626 670 ntBASIC6.84□□□□□ -1.31
SOX1O00570 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
SOX1O00570 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SOX1O00570 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 ZNF680P1-201ENST00000436625 1469 ntBASIC6.84□□□□□ -1.31
SOX1O00570 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX1O00570 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SOX1O00570 DDX18P6-201ENST00000450119 1997 ntBASIC6.84□□□□□ -1.32
SOX1O00570 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.32
SOX1O00570 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SOX1O00570 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
SOX1O00570 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SOX1O00570 AC007938.1-201ENST00000562524 2902 ntBASIC6.83□□□□□ -1.32
SOX1O00570 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX1O00570 AL133243.2-201ENST00000610331 1621 ntBASIC6.83□□□□□ -1.32
SOX1O00570 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX1O00570 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX1O00570 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms