Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDHB11Q9Y5F2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC245100.2-201ENST00000454544 1679 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL359922.2-201ENST00000581788 3017 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SKP174-201ENST00000363803 330 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 Y_RNA.216-201ENST00000364205 93 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 SNORA63C-201ENST00000364578 129 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL034417.1-201ENST00000399343 800 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 OR4K12P-201ENST00000406538 961 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RPL12P9-201ENST00000412942 488 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 SNRPFP1-201ENST00000414761 252 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC127537.1-201ENST00000418183 748 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL592293.2-201ENST00000422292 996 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 MTCO3P46-201ENST00000425787 232 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 OR51AB1P-201ENST00000429046 620 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC013403.1-201ENST00000436954 263 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 CACYBPP1-201ENST00000438592 684 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RPL7P12-201ENST00000446719 750 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC073476.1-201ENST00000452854 407 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 NDUFA5P7-201ENST00000452914 242 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RBMY2EP-202ENST00000456360 940 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RN7SL251P-201ENST00000464175 297 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC063943.1-201ENST00000465434 453 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC040975.1-201ENST00000472104 316 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC008496.1-201ENST00000509131 295 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 TRMT10BP1-201ENST00000519377 943 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 GTF2IP11-201ENST00000526931 420 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 BMS1P15-201ENST00000554269 1141 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 RPS7P1-201ENST00000571702 585 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 MIR378H-201ENST00000579966 83 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL355802.3-201ENST00000607571 545 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 uc_338.21-201ENST00000622458 147 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AC022743.1-201ENST00000624990 664 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 MIR193BHG-214ENST00000641765 509 ntBASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDHB11Q9Y5F2 MTND5P3-201ENST00000438536 1800 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms