Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 RN7SKP97-201ENST00000410966 333 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 RPL37P18-201ENST00000411602 243 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 RPL12P43-201ENST00000420608 499 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 OR5M12P-201ENST00000423388 929 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 COX6CP13-201ENST00000428703 226 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 RPL7P11-201ENST00000437586 658 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC002553.2-201ENST00000453217 340 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 IGLV2-34-201ENST00000490007 283 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 KCTD9P6-201ENST00000522306 950 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC012339.2-201ENST00000523996 453 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 EIF1P5-201ENST00000585002 234 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC022960.2-201ENST00000616300 666 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 TMEM30CP-203ENST00000637814 1035 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC138627.1-204ENST00000641894 765 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 AC132825.1-201ENST00000463573 2247 ntBASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP2Q9UDT6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 ATP5HP3-201ENST00000396994 486 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 GAPDHP15-201ENST00000398586 975 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AL021331.1-201ENST00000402817 582 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AL356968.2-201ENST00000412769 1257 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 RPL34P6-201ENST00000432390 345 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC004980.3-201ENST00000447046 365 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC090142.2-201ENST00000483263 416 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 RFPL4AP5-201ENST00000514977 504 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 CDH12P4-201ENST00000517835 295 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 CDH12P3-201ENST00000517935 295 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 CDH12P1-201ENST00000518435 295 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 BNIP3P1-201ENST00000547295 580 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 SETP1-201ENST00000556014 845 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AP001521.2-201ENST00000608772 546 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AL136295.6-201ENST00000610486 658 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AC006840.1-201ENST00000623069 542 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AP003400.2-201ENST00000624036 666 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 AP001642.1-201ENST00000624727 2117 ntBASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP2Q9UDT6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 OR6C64P-201ENST00000419708 825 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 OR2AH1P-201ENST00000425717 928 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 OR52J1P-201ENST00000450596 932 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 HMGB1P4-201ENST00000455362 567 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 RNA5SP103-201ENST00000459503 118 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 RPL5P16-201ENST00000471467 790 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AC005412.2-201ENST00000492004 341 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 OR7H2P-201ENST00000513483 306 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 MORF4L1P3-201ENST00000525966 950 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 RN7SL435P-201ENST00000584418 282 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AC005377.1-201ENST00000605126 456 ntBASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.85□□□□□ -1.47
CLIP2Q9UDT6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms