Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC005261.4-201ENST00000600047 1385 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 SNORA62.3-201ENST00000365110 153 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 RN7SKP202-201ENST00000410439 330 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC011998.1-201ENST00000433403 117 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC104763.1-201ENST00000475274 360 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 RN7SL132P-201ENST00000478131 296 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 RNU6-709P-201ENST00000517257 104 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 AC093249.4-201ENST00000564755 259 ntBASIC7.81□□□□□ -1.16
IFT140Q96RY7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC7.81□□□□□ -1.16
IFT140Q96RY7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
IFT140Q96RY7 AL731532.1-201ENST00000623972 4236 ntBASIC7.8□□□□□ -1.16
IFT140Q96RY7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 SCARNA15-201ENST00000607520 4325 ntBASIC7.8□□□□□ -1.16
IFT140Q96RY7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 AC007618.1-201ENST00000366455 732 ntBASIC7.8□□□□□ -1.16
IFT140Q96RY7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 AL132838.2-201ENST00000492041 314 ntBASIC7.8□□□□□ -1.16
IFT140Q96RY7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 AC039056.2-201ENST00000622261 511 ntBASIC7.8□□□□□ -1.16
IFT140Q96RY7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
IFT140Q96RY7 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
IFT140Q96RY7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
IFT140Q96RY7 OR51H2P-202ENST00000641424 3046 ntBASIC7.79□□□□□ -1.16
IFT140Q96RY7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
IFT140Q96RY7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
IFT140Q96RY7 SNORA70.9-201ENST00000384370 135 ntBASIC7.79□□□□□ -1.16
IFT140Q96RY7 SNORA11.2-201ENST00000408318 127 ntBASIC7.79□□□□□ -1.16
IFT140Q96RY7 PRSS3P4-201ENST00000453323 162 ntBASIC7.79□□□□□ -1.16
IFT140Q96RY7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
IFT140Q96RY7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
IFT140Q96RY7 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
IFT140Q96RY7 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 SDHCP2-201ENST00000398565 501 ntBASIC7.78□□□□□ -1.16
IFT140Q96RY7 EIF4A1P3-201ENST00000411521 244 ntBASIC7.78□□□□□ -1.16
IFT140Q96RY7 BX679664.2-201ENST00000439282 283 ntBASIC7.78□□□□□ -1.16
IFT140Q96RY7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
IFT140Q96RY7 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
IFT140Q96RY7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
IFT140Q96RY7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
IFT140Q96RY7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
IFT140Q96RY7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
IFT140Q96RY7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
IFT140Q96RY7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.16
IFT140Q96RY7 EIF2AP4-201ENST00000424793 1781 ntBASIC7.77□□□□□ -1.16
IFT140Q96RY7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
IFT140Q96RY7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
IFT140Q96RY7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 AC009643.2-201ENST00000603543 1448 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
IFT140Q96RY7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
IFT140Q96RY7 RNU6-628P-201ENST00000410675 107 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 OR8G2P-201ENST00000412796 908 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 VN1R37P-201ENST00000419096 748 ntBASIC7.77□□□□□ -1.17
IFT140Q96RY7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms