Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 FAM30C-201ENST00000561158 410 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDH1Q08174 MIR744-201ENST00000578242 98 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 RN7SL426P-201ENST00000579106 295 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 CTSLP2-201ENST00000580501 394 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC055764.2-201ENST00000610089 670 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC108479.2-201ENST00000617314 601 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC005753.1-201ENST00000623837 618 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 FER-210ENST00000628534 558 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 LCOR-201ENST00000286067 4542 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC112243.1-201ENST00000623949 3851 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDH1Q08174 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC074375.1-201ENST00000372993 192 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC025750.1-201ENST00000399891 379 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 VIM2P-201ENST00000402383 1294 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 Y_RNA.598-201ENST00000410480 95 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 HMGB1P11-201ENST00000413899 637 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AL356583.2-201ENST00000426536 280 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AL136231.1-201ENST00000429407 730 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 ZYG11AP1-201ENST00000430329 837 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 CLUHP1-201ENST00000435012 1190 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 PCBP2P1-201ENST00000437262 977 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC027124.1-201ENST00000440852 466 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 RPS4XP4-201ENST00000443195 763 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 RPS7P4-201ENST00000444127 582 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 RPS10P28-201ENST00000480396 498 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC019235.1-201ENST00000503847 207 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 NDUFB4P2-201ENST00000509515 391 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 NPM1P21-201ENST00000513394 762 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC073581.1-201ENST00000519036 575 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH1Q08174 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC018558.5-201ENST00000565840 952 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC137800.2-201ENST00000574375 120 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 RN7SL270P-201ENST00000579643 281 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC010680.3-201ENST00000604215 520 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AL590282.1-201ENST00000610379 1136 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH1Q08174 AC008250.2-201ENST00000615261 205 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AL121985.3-201ENST00000620690 523 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC106782.7-201ENST00000624024 418 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC133555.5-201ENST00000624430 418 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH1Q08174 MT-RNR2-201ENST00000387347 1559 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH1Q08174 RACGAP1P-201ENST00000550663 1879 ntBASIC6.55□□□□□ -1.36
PCDH1Q08174 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms