Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC8P31273 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC8P31273 PCNAP1-201ENST00000505363 709 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC8P31273 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 RN7SL690P-201ENST00000582087 240 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AC209154.1-201ENST00000582156 337 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 RN7SL52P-201ENST00000584271 284 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC8P31273 AC068790.4-201ENST00000602474 263 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AL512782.1-201ENST00000603093 364 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AL023583.1-201ENST00000607518 1143 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AC012467.1-201ENST00000607740 256 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AC007786.3-201ENST00000615154 596 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AL162574.1-201ENST00000615702 950 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AC108359.1-201ENST00000616451 1211 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 RN7SL722P-201ENST00000617780 284 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 RN7SL565P-201ENST00000618246 284 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 AC104820.1-201ENST00000624183 307 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 CR381572.2-201ENST00000624852 397 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC8P31273 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC8P31273 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC8P31273 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC8P31273 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC8P31273 AL355834.1-201ENST00000556602 3965 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC8P31273 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 RNA5SP191-201ENST00000362585 102 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AL589655.1-201ENST00000405398 482 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 BX276092.6-201ENST00000430476 250 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC8P31273 NDUFA5P1-201ENST00000433858 341 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC8P31273 AURKAPS2-201ENST00000454983 333 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 BX276092.8-201ENST00000455722 250 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC8P31273 RWDD4P1-201ENST00000488019 565 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC005412.2-201ENST00000492004 341 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC090058.1-201ENST00000498788 435 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC093815.1-201ENST00000508637 280 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC012339.2-201ENST00000523996 453 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC8P31273 OR5AN2P-201ENST00000534535 896 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC8P31273 EIF1P5-201ENST00000585002 234 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 BMS1P7-201ENST00000602440 1052 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC8P31273 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC8P31273 AC019131.2-201ENST00000609071 870 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 MIR378J-201ENST00000611988 109 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
HOXC8P31273 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC8P31273 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC8P31273 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
HOXC8P31273 AC239868.2-201ENST00000564237 4527 ntBASIC5.53□□□□□ -1.52
HOXC8P31273 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXC8P31273 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC8P31273 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC8P31273 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HOXC8P31273 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC8P31273 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC8P31273 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC8P31273 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC8P31273 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC8P31273 AL390316.1-201ENST00000406279 553 ntBASIC5.52□□□□□ -1.53
HOXC8P31273 AL358178.1-201ENST00000407698 397 ntBASIC5.52□□□□□ -1.53
HOXC8P31273 RNU2-50P-201ENST00000410494 143 ntBASIC5.52□□□□□ -1.53
HOXC8P31273 HYALP1-201ENST00000417674 1279 ntBASIC5.52□□□□□ -1.53
HOXC8P31273 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC8P31273 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC8P31273 TRIM60P13-201ENST00000432350 1283 ntBASIC5.52□□□□□ -1.53
HOXC8P31273 RSL24D1P8-201ENST00000434442 492 ntBASIC5.52□□□□□ -1.53
HOXC8P31273 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms