Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL121834.1-201ENST00000572284 509 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.55□□□□□ -1.2
RXRBP28702 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC7.55□□□□□ -1.2
RXRBP28702 AC020910.2-201ENST00000603635 610 ntBASIC7.55□□□□□ -1.2
RXRBP28702 Z82195.1-201ENST00000604558 398 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC024589.2-201ENST00000605642 1294 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 AC024060.1-201ENST00000607052 494 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC010975.3-201ENST00000618727 978 ntBASIC7.55□□□□□ -1.2
RXRBP28702 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.55□□□□□ -1.2
RXRBP28702 AC092656.1-203ENST00000624134 423 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AL596275.2-208ENST00000641192 594 ntBASIC7.55□□□□□ -1.2
RXRBP28702 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.55□□□□□ -1.2
RXRBP28702 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.55□□□□□ -1.2
RXRBP28702 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 OR2M1P-201ENST00000318104 951 ntBASIC7.54□□□□□ -1.2
RXRBP28702 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RXRBP28702 RNU6-1215P-201ENST00000384441 102 ntBASIC7.54□□□□□ -1.2
RXRBP28702 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RXRBP28702 AC019050.1-201ENST00000418508 492 ntBASIC7.54□□□□□ -1.2
RXRBP28702 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 VN1R42P-201ENST00000424651 344 ntBASIC7.54□□□□□ -1.2
RXRBP28702 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 RPS26P4-201ENST00000431743 355 ntBASIC7.54□□□□□ -1.2
RXRBP28702 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 GTF2IP7-202ENST00000436677 309 ntBASIC7.54□□□□□ -1.2
RXRBP28702 ELOCP8-201ENST00000439309 332 ntBASIC7.54□□□□□ -1.2
RXRBP28702 ELOCP15-201ENST00000442090 332 ntBASIC7.54□□□□□ -1.2
RXRBP28702 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.54□□□□□ -1.2
RXRBP28702 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.54□□□□□ -1.2
RXRBP28702 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RXRBP28702 IGHVIII-2-1-201ENST00000518843 291 ntBASIC7.54□□□□□ -1.2
RXRBP28702 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 GTF2IP11-201ENST00000526931 420 ntBASIC7.54□□□□□ -1.2
RXRBP28702 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 OR6M2P-201ENST00000529831 871 ntBASIC7.54□□□□□ -1.2
RXRBP28702 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 AL354943.1-201ENST00000572103 781 ntBASIC7.54□□□□□ -1.2
RXRBP28702 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.54□□□□□ -1.2
RXRBP28702 LARP7P1-201ENST00000605576 316 ntBASIC7.54□□□□□ -1.2
RXRBP28702 uc_338.26-201ENST00000612659 160 ntBASIC7.54□□□□□ -1.2
RXRBP28702 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.54□□□□□ -1.2
RXRBP28702 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 MIR7703-201ENST00000620784 77 ntBASIC7.54□□□□□ -1.2
RXRBP28702 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.54□□□□□ -1.2
RXRBP28702 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RXRBP28702 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 AC091046.3-201ENST00000631455 1574 ntBASIC7.54□□□□□ -1.2
RXRBP28702 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RXRBP28702 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RXRBP28702 AL117339.4-201ENST00000608335 7063 ntBASIC7.53□□□□□ -1.2
RXRBP28702 MTND4P31-201ENST00000425607 1343 ntBASIC7.53□□□□□ -1.2
RXRBP28702 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.53□□□□□ -1.2
RXRBP28702 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RXRBP28702 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
RXRBP28702 ANKRD36P1-201ENST00000344424 659 ntBASIC7.53□□□□□ -1.2
RXRBP28702 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RXRBP28702 MIR23B-201ENST00000384832 97 ntBASIC7.53□□□□□ -1.2
RXRBP28702 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.53□□□□□ -1.2
RXRBP28702 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.53□□□□□ -1.2
RXRBP28702 GTF2IP2-201ENST00000424290 697 ntBASIC7.53□□□□□ -1.2
RXRBP28702 MTCO2P19-201ENST00000427513 598 ntBASIC7.53□□□□□ -1.2
RXRBP28702 FABP5P2-201ENST00000439042 408 ntBASIC7.53□□□□□ -1.2
RXRBP28702 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.53□□□□□ -1.2
RXRBP28702 AL589880.1-201ENST00000448271 287 ntBASIC7.53□□□□□ -1.2
RXRBP28702 SDC4P-201ENST00000453285 601 ntBASIC7.53□□□□□ -1.2
RXRBP28702 SNORA58-201ENST00000505219 137 ntBASIC7.53□□□□□ -1.2
RXRBP28702 MTCO1P31-201ENST00000506355 492 ntBASIC7.53□□□□□ -1.2
RXRBP28702 AC004980.4-201ENST00000513375 203 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms