Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 MTCO1P11-201ENST00000429111 1528 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AC017002.4-201ENST00000604721 1525 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AL672167.1-204ENST00000641875 3017 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 RPL23P2-201ENST00000320371 421 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 RPL23AP4-201ENST00000427757 463 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 ZFAND6P1-201ENST00000434138 605 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 SCAND3P1-201ENST00000439854 1060 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 RPS15AP29-201ENST00000445539 400 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AC012512.1-201ENST00000446594 718 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 HSPE1P22-201ENST00000456856 327 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 AC090114.3-201ENST00000479267 829 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AC090543.1-201ENST00000492168 485 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 RNA5SP43-201ENST00000516559 110 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.07□□□□□ -1.6
PSMB4P28070 AP000859.1-201ENST00000525536 307 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.07□□□□□ -1.6
PSMB4P28070 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.07□□□□□ -1.6
PSMB4P28070 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.07□□□□□ -1.6
PSMB4P28070 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 AC084373.1-201ENST00000603311 235 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.07□□□□□ -1.6
PSMB4P28070 MIR6862-1-201ENST00000613016 70 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 MIR6862-2-201ENST00000614755 70 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 AC015914.2-201ENST00000618167 288 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 MIR6729-201ENST00000618194 65 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.07□□□□□ -1.6
PSMB4P28070 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 OR9K1P-202ENST00000641111 3217 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.07□□□□□ -1.6
PSMB4P28070 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 ZNF733P-202ENST00000444809 1573 ntBASIC5.07□□□□□ -1.6
PSMB4P28070 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.07□□□□□ -1.6
PSMB4P28070 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
PSMB4P28070 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PSMB4P28070 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PSMB4P28070 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PSMB4P28070 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.06□□□□□ -1.6
PSMB4P28070 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PSMB4P28070 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PSMB4P28070 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PSMB4P28070 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.06□□□□□ -1.6
PSMB4P28070 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PSMB4P28070 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PSMB4P28070 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PSMB4P28070 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PSMB4P28070 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 MT-TP-201ENST00000387461 68 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 CCNB2P1-201ENST00000399411 1150 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 RPL5P19-201ENST00000404228 893 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 CTSL3P-202ENST00000412179 788 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PSMB4P28070 AL355433.1-201ENST00000422804 300 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 AC005033.1-201ENST00000428904 813 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.06□□□□□ -1.6
PSMB4P28070 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.06□□□□□ -1.6
PSMB4P28070 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 AC093716.1-201ENST00000435923 377 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.06□□□□□ -1.6
PSMB4P28070 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.06□□□□□ -1.6
PSMB4P28070 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
PSMB4P28070 GTF3AP5-201ENST00000442645 697 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 OR7E125P-201ENST00000443450 846 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.06□□□□□ -1.6
PSMB4P28070 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.06□□□□□ -1.6
PSMB4P28070 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.06□□□□□ -1.6
PSMB4P28070 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms