Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC093849.1-201ENST00000563631 2209 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFSF4P23510 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFSF4P23510 RN7SKP74-201ENST00000362849 309 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RNU1-134P-201ENST00000362935 165 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 RNU11-201ENST00000387069 134 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 U3.23-201ENST00000391132 200 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 HNRNPDP2-201ENST00000406475 478 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RN7SKP278-201ENST00000410504 342 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 PRELID3BP11-201ENST00000414230 479 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RPL35AP31-201ENST00000418340 337 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC009506.2-201ENST00000420635 840 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RPL24P2-201ENST00000421023 475 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC092393.1-201ENST00000439625 742 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AL590004.3-202ENST00000445883 451 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 RPL7P59-201ENST00000447700 943 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RPL23AP15-201ENST00000450202 459 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AURKAPS1-201ENST00000451805 1212 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC098847.1-201ENST00000473094 348 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 MARK2P8-201ENST00000476069 952 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC126121.1-201ENST00000482313 553 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC083795.1-201ENST00000491760 320 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC034244.1-201ENST00000507687 207 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC093755.1-201ENST00000512950 1023 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.24□□□□□ -1.57
TNFSF4P23510 HSD3BP3-201ENST00000514706 994 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RNU6-488P-201ENST00000515918 99 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 SCARNA6.1-201ENST00000516989 238 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC036111.2-201ENST00000533247 901 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 CYCSP38-201ENST00000559840 322 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC027229.1-201ENST00000583887 253 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 AL360012.1-201ENST00000602813 131 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC068313.1-201ENST00000604028 1008 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC008555.7-201ENST00000605008 583 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 AL355493.4-201ENST00000618530 292 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC022509.4-201ENST00000621404 572 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AL390318.1-201ENST00000624564 687 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 AC136428.4-201ENST00000634254 1155 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.24□□□□□ -1.57
TNFSF4P23510 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
TNFSF4P23510 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 AC015799.1-201ENST00000622996 3122 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 ZNF876P-202ENST00000398732 1485 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 Z99496.1-201ENST00000469424 1477 ntBASIC5.24□□□□□ -1.57
TNFSF4P23510 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFSF4P23510 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TNFSF4P23510 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.24□□□□□ -1.57
TNFSF4P23510 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
TNFSF4P23510 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TNFSF4P23510 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TNFSF4P23510 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TNFSF4P23510 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms