Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TBCAP2-201ENST00000416175 326 ntBASIC2.86□□□□□ -1.95
APOBP04114 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 AL132838.2-201ENST00000492041 314 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC092709.1-201ENST00000521355 1045 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.86□□□□□ -1.95
APOBP04114 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 AC007179.3-201ENST00000604976 235 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 AC005899.7-201ENST00000618199 588 ntBASIC2.86□□□□□ -1.95
APOBP04114 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 VN1R37P-201ENST00000419096 748 ntBASIC2.86□□□□□ -1.95
APOBP04114 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 AC015908.5-201ENST00000623289 343 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 AC068733.2-201ENST00000605434 1418 ntBASIC2.86□□□□□ -1.95
APOBP04114 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
APOBP04114 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC2.85□□□□□ -1.95
APOBP04114 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC2.85□□□□□ -1.95
APOBP04114 LINC00993-201ENST00000420453 540 ntBASIC2.85□□□□□ -1.95
APOBP04114 RPL7AP49-201ENST00000429522 581 ntBASIC2.85□□□□□ -1.95
APOBP04114 AL591438.1-201ENST00000433508 581 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC073052.1-201ENST00000440417 714 ntBASIC2.85□□□□□ -1.95
APOBP04114 RPL21P89-201ENST00000444021 467 ntBASIC2.85□□□□□ -1.95
APOBP04114 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 RN7SL435P-201ENST00000584418 282 ntBASIC2.85□□□□□ -1.95
APOBP04114 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 AC025574.1-201ENST00000554784 1653 ntBASIC2.85□□□□□ -1.95
APOBP04114 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
APOBP04114 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
APOBP04114 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
APOBP04114 AC040958.1-201ENST00000561102 201 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC011471.1-201ENST00000585766 187 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
APOBP04114 AC005618.4-201ENST00000625053 554 ntBASIC2.85□□□□□ -1.95
APOBP04114 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC2.85□□□□□ -1.95
APOBP04114 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
APOBP04114 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
APOBP04114 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 COX6CP15-201ENST00000426313 211 ntBASIC2.85□□□□□ -1.95
APOBP04114 H2AFZP5-201ENST00000446960 382 ntBASIC2.85□□□□□ -1.95
APOBP04114 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC2.85□□□□□ -1.95
APOBP04114 DYNLL1P4-201ENST00000549314 266 ntBASIC2.85□□□□□ -1.95
APOBP04114 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.85□□□□□ -1.95
APOBP04114 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AC090181.2-201ENST00000602975 672 ntBASIC2.85□□□□□ -1.95
APOBP04114 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.85□□□□□ -1.95
APOBP04114 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 ABCC13-202ENST00000463099 3842 ntBASIC2.85□□□□□ -1.95
APOBP04114 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 RN7SKP177-201ENST00000410567 355 ntBASIC2.85□□□□□ -1.95
APOBP04114 MRPL50P1-201ENST00000431951 384 ntBASIC2.85□□□□□ -1.95
APOBP04114 AL359265.1-201ENST00000440296 795 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 DHFRP3-201ENST00000455595 559 ntBASIC2.85□□□□□ -1.95
APOBP04114 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 AC021193.1-201ENST00000511607 420 ntBASIC2.85□□□□□ -1.95
APOBP04114 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms