Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CUEDC1Q9NWM3 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 MTND4P1-201ENST00000457501 1466 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 WNK1-220ENST00000574564 1401 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 RBPJP2-201ENST00000618187 1444 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 Y_RNA.384-201ENST00000383909 102 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 MT-TG-201ENST00000387429 68 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC025750.1-201ENST00000399891 379 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC009161.1-201ENST00000417306 376 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PPIL1P1-201ENST00000423936 499 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 BX890604.2-201ENST00000427883 474 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 RPL23AP20-201ENST00000447965 421 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 MTCO3P20-201ENST00000454926 688 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 Y_RNA.632-201ENST00000459189 102 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 DYNLL1P6-201ENST00000503440 264 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PTP4A1P4-201ENST00000512479 322 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 BTF3P13-201ENST00000513224 490 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC108064.1-201ENST00000513791 460 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC026801.2-201ENST00000515352 425 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 Y_RNA.711-201ENST00000516993 102 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 ATP5J2P4-201ENST00000538774 267 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 MIR3149-201ENST00000584629 83 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC090948.2-201ENST00000607363 564 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC091768.1-201ENST00000609258 930 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 STMN1P1-201ENST00000617809 440 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 uc_338.21-201ENST00000622458 147 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 AC073488.2-201ENST00000631903 751 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 NSRP1P1-201ENST00000444067 1693 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PRNCR1-201ENST00000635449 12727 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CASC19-243ENST00000641588 1546 ntBASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CUEDC1Q9NWM3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 AL031985.3-201ENST00000565390 2449 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 ZNF37BP-203ENST00000452306 1352 ntBASIC7.1□□□□□ -1.27
CUEDC1Q9NWM3 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms