Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 IL6STP1-201ENST00000346911 1020 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 SNORD1C-201ENST00000363315 78 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 RNU6-931P-201ENST00000363850 107 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 RNA5SP485-201ENST00000365053 119 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 YWHAZP4-201ENST00000392459 708 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 PSMA6P1-201ENST00000400275 741 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC007899.1-201ENST00000412776 775 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 MTCYBP38-201ENST00000417160 1123 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 EIF1P1-201ENST00000421436 341 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL157884.1-201ENST00000424561 454 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 COX6CP2-201ENST00000444980 225 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC093166.3-201ENST00000448785 303 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 CFTRP1-201ENST00000456646 183 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 RN7SL39P-201ENST00000462264 297 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC091959.2-201ENST00000477363 321 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC008945.1-201ENST00000505144 499 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 HMGN1P16-201ENST00000508308 283 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC106038.2-201ENST00000520706 568 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL139174.1-201ENST00000531489 886 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AP005205.1-201ENST00000563503 508 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL606834.2-201ENST00000602954 668 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 U73023.1-201ENST00000603134 700 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC126118.1-201ENST00000607744 628 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC131235.4-201ENST00000609288 620 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC024941.1-201ENST00000612250 334 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC010678.1-201ENST00000614118 713 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC069234.4-201ENST00000621276 412 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AL357562.1-201ENST00000624911 609 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC010325.3-201ENST00000641084 394 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC079753.1-201ENST00000623243 3868 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC012078.1-201ENST00000405035 1646 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC092724.1-201ENST00000624623 3397 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 AC005725.1-201ENST00000577346 2607 ntBASIC6.46□□□□□ -1.38
FOXP3Q9BZS1 CDY11P-201ENST00000447168 1651 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 HDAC1P2-201ENST00000453661 1398 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 SMG1P5-202ENST00000529428 4219 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 SMG1P2-201ENST00000566127 4221 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNU4-21P-201ENST00000362802 126 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNA5SP514-201ENST00000363717 111 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNU6-694P-201ENST00000364071 147 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 RNA5SP77-201ENST00000365394 120 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 Y_RNA.359-201ENST00000365498 102 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 ATP5F1P4-201ENST00000397288 746 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 LINC01347-201ENST00000417964 355 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 OR5AW1P-201ENST00000426334 1006 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 KCTD9P1-201ENST00000430462 1167 ntBASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXP3Q9BZS1 USP9YP35-201ENST00000435696 412 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms