Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SNORA51.1-201ENST00000363243 140 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SNORD116-9-201ENST00000384000 95 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SNORD116-3-201ENST00000384287 95 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SNORD116-7-201ENST00000384404 95 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SNORD116-5-201ENST00000384462 95 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AP002784.2-201ENST00000397300 549 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RPS3AP44-201ENST00000425466 790 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MTCO1P52-201ENST00000433928 531 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 UBE2D3P1-201ENST00000436669 444 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RPL12P18-201ENST00000437175 325 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AMYP1-201ENST00000440059 1023 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL391987.1-201ENST00000441025 200 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RPL23AP60-201ENST00000450011 454 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC016027.4-201ENST00000450866 277 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RN7SL352P-201ENST00000466002 277 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RPS27AP16-201ENST00000492222 470 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RN7SKP238-201ENST00000516483 249 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 GCSHP4-201ENST00000538792 439 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC090826.1-203ENST00000569235 490 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC022884.3-201ENST00000579571 248 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC121247.2-201ENST00000604776 136 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 AC245100.7-201ENST00000609678 442 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 FAM27E2-201ENST00000619668 403 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MTND4P34-201ENST00000572715 1371 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 DDX18P4-201ENST00000511690 1966 ntBASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIMC1Q8NDZ2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RNU6-623P-201ENST00000363143 105 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RNU4-24P-201ENST00000364565 139 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RNU6-207P-201ENST00000384137 107 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RNA5SP187-201ENST00000384400 119 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 OR8V1P-201ENST00000395193 873 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AC245096.1-201ENST00000413104 546 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 Z68694.1-201ENST00000413929 841 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RPL35AP3-201ENST00000414680 288 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 EIF4A1P1-201ENST00000420241 934 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 HMGN2P27-201ENST00000427352 270 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 RPS27AP6-201ENST00000427962 448 ntBASIC5.61□□□□□ -1.51
SIMC1Q8NDZ2 AL365396.1-201ENST00000430854 671 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms