Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 MIR600-201ENST00000385007 98 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 MIR765-201ENST00000390226 114 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 RNU4-27P-201ENST00000410889 139 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 TATDN1P1-201ENST00000414123 891 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL158827.1-201ENST00000416300 391 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC007394.1-201ENST00000421941 531 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL645931.1-201ENST00000439737 410 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL353898.1-201ENST00000444055 238 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 MTATP6P14-201ENST00000455189 673 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 Z92846.1-201ENST00000456203 268 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC092691.2-201ENST00000461787 803 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC093270.2-201ENST00000486157 792 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 SNRPCP2-201ENST00000504370 475 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AP003355.1-201ENST00000518956 587 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 OR4A43P-201ENST00000532938 908 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 MIR4760-201ENST00000585040 80 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 RPAP2P1-201ENST00000603626 1168 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC034229.4-201ENST00000607861 441 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AP001033.2-201ENST00000609701 1003 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC090527.3-201ENST00000619041 548 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AP003400.3-201ENST00000624904 346 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC005618.4-201ENST00000625053 554 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL356118.1-201ENST00000635272 1078 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AL445984.1-201ENST00000637834 659 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 AC100757.1-201ENST00000616872 1835 ntBASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4BQ8IWT1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
SCN4BQ8IWT1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SCN4BQ8IWT1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SCN4BQ8IWT1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.59□□□□□ -1.52
SCN4BQ8IWT1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 ZNF90P1-201ENST00000480493 1951 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 SNORA17.1-201ENST00000362945 126 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 RNU1-106P-201ENST00000384382 164 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 RNU6-31P-201ENST00000384388 108 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 RNU6-1000P-201ENST00000391066 106 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AC211486.3-201ENST00000412694 621 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 MTND4P11-201ENST00000417020 1058 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AC138761.5-201ENST00000433967 325 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AC093716.1-201ENST00000435923 377 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 MTCYBP29-201ENST00000436327 1006 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 GAPDHP58-201ENST00000438477 1006 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 GTF2F2P1-201ENST00000511083 675 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 EIF3KP3-201ENST00000514461 639 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 HMGN1P9-201ENST00000515212 298 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AP000859.1-201ENST00000525536 307 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AC024940.3-201ENST00000538551 316 ntBASIC5.58□□□□□ -1.52
SCN4BQ8IWT1 AC114947.2-201ENST00000565748 2125 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms