Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 ATG10-AS1-201ENST00000504846 648 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 HMGB1P44-201ENST00000508597 572 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC110775.1-201ENST00000513721 462 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC233702.9-201ENST00000581528 203 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 TAS2R6P-201ENST00000605022 826 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AP002799.1-201ENST00000623552 423 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AP001784.1-201ENST00000624107 428 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 DDX18P6-201ENST00000450119 1997 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 AP001642.1-201ENST00000624727 2117 ntBASIC4.81□□□□□ -1.64
CCDC71Q8IV32 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC71Q8IV32 OR55B1P-203ENST00000641518 2602 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 OR5T3-201ENST00000303059 1023 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 RN7SKP115-201ENST00000363177 317 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 U3.36-201ENST00000408418 213 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC007738.1-201ENST00000413892 348 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AL139128.1-201ENST00000413921 941 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AJ239321.1-201ENST00000424255 564 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 MAPRE1P3-201ENST00000435438 796 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 PA2G4P6-201ENST00000438325 1197 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 RPS11P7-201ENST00000442125 465 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 BX842559.2-201ENST00000451418 605 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 MTND3P4-201ENST00000453537 303 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 DNAJB5P1-201ENST00000454004 806 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 CDH12P4-201ENST00000517835 295 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 CDH12P3-201ENST00000517935 295 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 CDH12P1-201ENST00000518435 295 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AL049539.1-201ENST00000611964 459 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC074140.1-201ENST00000621617 208 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AL731566.1-201ENST00000620490 1937 ntBASIC4.8□□□□□ -1.64
CCDC71Q8IV32 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71Q8IV32 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC017079.1-201ENST00000333650 415 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AL136116.2-201ENST00000404020 785 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 RN7SKP126-201ENST00000411143 300 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC71Q8IV32 RBMY2KP-201ENST00000418221 992 ntBASIC4.79□□□□□ -1.64
CCDC71Q8IV32 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms