Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.35□□□□□ -1.55
LIMK1P53667 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.35□□□□□ -1.55
LIMK1P53667 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.35□□□□□ -1.55
LIMK1P53667 AC136624.4-201ENST00000573044 370 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 AL161616.1-201ENST00000611867 286 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AC007786.3-201ENST00000615154 596 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.35□□□□□ -1.55
LIMK1P53667 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.35□□□□□ -1.55
LIMK1P53667 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 THAP12P4-201ENST00000528321 2266 ntBASIC5.35□□□□□ -1.55
LIMK1P53667 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIMK1P53667 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
LIMK1P53667 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 HSPD1P11-201ENST00000508643 1702 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 MFSD8-216ENST00000641147 4009 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 AL034403.1-201ENST00000399414 885 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AL133388.1-201ENST00000404509 287 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 RN7SKP126-201ENST00000411143 300 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LIMK1P53667 CYCSP11-201ENST00000436426 315 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 PTMAP3-201ENST00000447474 330 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AL513533.1-201ENST00000453728 415 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC008897.1-201ENST00000494006 347 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 RPS4XP20-201ENST00000505751 772 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.34□□□□□ -1.55
LIMK1P53667 AL121594.2-201ENST00000541658 472 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC087888.1-201ENST00000550884 1254 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC127381.1-201ENST00000555979 939 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 AC007346.2-201ENST00000564816 892 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.34□□□□□ -1.55
LIMK1P53667 MIR6133-201ENST00000617057 108 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 CYP4F35P-202ENST00000636121 390 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 AL163152.1-201ENST00000642001 374 ntBASIC5.34□□□□□ -1.55
LIMK1P53667 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.34□□□□□ -1.55
LIMK1P53667 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
LIMK1P53667 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIMK1P53667 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.34□□□□□ -1.56
LIMK1P53667 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.34□□□□□ -1.56
LIMK1P53667 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
LIMK1P53667 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LIMK1P53667 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
LIMK1P53667 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 DDX18P3-201ENST00000404856 2007 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 RNU6-398P-201ENST00000384143 109 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 AC093719.1-202ENST00000392735 373 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.33□□□□□ -1.56
LIMK1P53667 HSPE1P16-201ENST00000426640 348 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.33□□□□□ -1.56
LIMK1P53667 MTND4LP7-201ENST00000431728 294 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIMK1P53667 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.33□□□□□ -1.56
LIMK1P53667 AL672138.1-201ENST00000450604 1015 ntBASIC5.33□□□□□ -1.56
LIMK1P53667 CLIC4P1-201ENST00000453177 535 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms