Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MTND4LP13-201ENST00000425022 298 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.41□□□□□ -1.7
CX3CR1P49238 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AC022022.1-201ENST00000430304 178 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AL391987.1-201ENST00000441025 200 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AL591623.2-201ENST00000449978 222 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 CYCSP34-201ENST00000458172 304 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 snoU109.6-201ENST00000516831 118 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AL512310.9-201ENST00000553311 948 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.41□□□□□ -1.7
CX3CR1P49238 SULT1C2P2-201ENST00000562517 294 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 MIR8069-1-201ENST00000616627 86 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 MIR8069-2-201ENST00000621412 86 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.41□□□□□ -1.7
CX3CR1P49238 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CX3CR1P49238 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CX3CR1P49238 PANDAR-201ENST00000629595 1506 ntBASIC4.41□□□□□ -1.7
CX3CR1P49238 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CX3CR1P49238 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
CX3CR1P49238 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CR1P49238 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
CX3CR1P49238 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.4□□□□□ -1.7
CX3CR1P49238 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CR1P49238 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CR1P49238 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CX3CR1P49238 AC126323.6-202ENST00000568092 3511 ntBASIC4.4□□□□□ -1.7
CX3CR1P49238 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CR1P49238 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
CX3CR1P49238 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CR1P49238 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CX3CR1P49238 RN7SKP162-201ENST00000363605 345 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 DUTP5-201ENST00000406790 469 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 SNORA77-201ENST00000408716 125 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CX3CR1P49238 AC093084.1-201ENST00000424233 687 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CR1P49238 BX323845.1-201ENST00000432417 179 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CR1P49238 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CR1P49238 AL035551.1-201ENST00000446931 348 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AL691482.1-201ENST00000453255 87 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC069277.2-201ENST00000454211 432 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AL356981.1-201ENST00000454879 684 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC011225.1-201ENST00000457751 369 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC112206.1-201ENST00000468416 477 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC090142.2-201ENST00000483263 416 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC073073.1-201ENST00000493920 463 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC010350.1-201ENST00000504908 231 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 IGLVIV-64-201ENST00000518581 301 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 IGKV2-18-201ENST00000522607 343 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 IGKV3D-34-201ENST00000522638 302 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CR1P49238 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.4□□□□□ -1.71
CX3CR1P49238 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CR1P49238 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.4□□□□□ -1.71
CX3CR1P49238 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CR1P49238 SNX6P1-201ENST00000601728 1224 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC095055.1-201ENST00000603472 1113 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 IMMP1LP3-201ENST00000604197 224 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 AC012213.4-201ENST00000606457 354 ntBASIC4.4□□□□□ -1.71
CX3CR1P49238 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CR1P49238 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CR1P49238 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.4□□□□□ -1.71
CX3CR1P49238 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CR1P49238 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CR1P49238 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CR1P49238 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CX3CR1P49238 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CR1P49238 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.4□□□□□ -1.71
CX3CR1P49238 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CR1P49238 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
CX3CR1P49238 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CR1P49238 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CR1P49238 SNORA70.10-201ENST00000384515 134 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CR1P49238 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.39□□□□□ -1.71
CX3CR1P49238 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CR1P49238 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.39□□□□□ -1.71
CX3CR1P49238 OR52B5P-201ENST00000435337 951 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms