Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL008636.1-201ENST00000625038 1018 ntBASIC7.57□□□□□ -1.2
RXRBP28702 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
RXRBP28702 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RXRBP28702 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.57□□□□□ -1.2
RXRBP28702 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.57□□□□□ -1.2
RXRBP28702 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RXRBP28702 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RXRBP28702 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RXRBP28702 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RXRBP28702 Y_RNA.3-201ENST00000362331 103 ntBASIC7.56□□□□□ -1.2
RXRBP28702 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RXRBP28702 AL663109.1-201ENST00000411498 844 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 RPS3AP37-201ENST00000419176 745 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.56□□□□□ -1.2
RXRBP28702 AC124944.2-201ENST00000429866 1242 ntBASIC7.56□□□□□ -1.2
RXRBP28702 BX119917.1-201ENST00000432517 502 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 AC092393.1-201ENST00000439625 742 ntBASIC7.56□□□□□ -1.2
RXRBP28702 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.56□□□□□ -1.2
RXRBP28702 snoU13.20-201ENST00000459180 104 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.56□□□□□ -1.2
RXRBP28702 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.56□□□□□ -1.2
RXRBP28702 AC096754.1-201ENST00000508904 818 ntBASIC7.56□□□□□ -1.2
RXRBP28702 RNU6-1178P-201ENST00000516674 107 ntBASIC7.56□□□□□ -1.2
RXRBP28702 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 CCNG2P1-201ENST00000549521 1000 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.56□□□□□ -1.2
RXRBP28702 SETP1-201ENST00000556014 845 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 AP005205.1-201ENST00000563503 508 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.56□□□□□ -1.2
RXRBP28702 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.56□□□□□ -1.2
RXRBP28702 MIR4284-201ENST00000578924 81 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 AC024255.1-201ENST00000614376 102 ntBASIC7.56□□□□□ -1.2
RXRBP28702 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 FRG1DP-201ENST00000635586 771 ntBASIC7.56□□□□□ -1.2
RXRBP28702 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 ZNF663P-202ENST00000641770 1131 ntBASIC7.56□□□□□ -1.2
RXRBP28702 AC073342.2-201ENST00000595842 1800 ntBASIC7.56□□□□□ -1.2
RXRBP28702 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RXRBP28702 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RXRBP28702 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.56□□□□□ -1.2
RXRBP28702 AC010168.2-201ENST00000562691 5428 ntBASIC7.56□□□□□ -1.2
RXRBP28702 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RXRBP28702 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RXRBP28702 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.55□□□□□ -1.2
RXRBP28702 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 AL021331.1-201ENST00000402817 582 ntBASIC7.55□□□□□ -1.2
RXRBP28702 FCF1P5-201ENST00000406490 482 ntBASIC7.55□□□□□ -1.2
RXRBP28702 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.55□□□□□ -1.2
RXRBP28702 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.55□□□□□ -1.2
RXRBP28702 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 OR5W1P-201ENST00000423705 938 ntBASIC7.55□□□□□ -1.2
RXRBP28702 RPF2P1-201ENST00000424137 906 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC008072.1-201ENST00000434254 824 ntBASIC7.55□□□□□ -1.2
RXRBP28702 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.55□□□□□ -1.2
RXRBP28702 RPS24P1-201ENST00000438550 371 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AL671855.1-201ENST00000446875 1203 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC104978.1-201ENST00000449387 391 ntBASIC7.55□□□□□ -1.2
RXRBP28702 RNU7-125P-201ENST00000458760 62 ntBASIC7.55□□□□□ -1.2
RXRBP28702 OR9N1P-202ENST00000494289 481 ntBASIC7.55□□□□□ -1.2
RXRBP28702 PCNAP1-201ENST00000505363 709 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.55□□□□□ -1.2
RXRBP28702 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RXRBP28702 AC100784.1-201ENST00000522790 310 ntBASIC7.55□□□□□ -1.2
RXRBP28702 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.55□□□□□ -1.2
RXRBP28702 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RXRBP28702 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.55□□□□□ -1.2
RXRBP28702 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.55□□□□□ -1.2
RXRBP28702 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.55□□□□□ -1.2
RXRBP28702 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.55□□□□□ -1.2
RXRBP28702 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms