Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC009237.12-201ENST00000604755 742 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC3P19447 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AC018628.1-201ENST00000624147 3819 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 NCLP2-201ENST00000416078 1462 ntBASIC7.28□□□□□ -1.24
ERCC3P19447 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
ERCC3P19447 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC3P19447 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
ERCC3P19447 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.27□□□□□ -1.24
ERCC3P19447 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.24
ERCC3P19447 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
ERCC3P19447 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 RNU6-1300P-201ENST00000391046 108 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 RN7SKP144-201ENST00000411108 279 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC3P19447 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC3P19447 RPS7P14-201ENST00000426405 583 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC007559.1-201ENST00000428736 355 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AL589823.1-201ENST00000429577 183 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 PCBP2P1-201ENST00000437262 977 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AL391987.1-201ENST00000441025 200 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.27□□□□□ -1.25
ERCC3P19447 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC3P19447 HMGB1P4-201ENST00000455362 567 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.27□□□□□ -1.25
ERCC3P19447 RN7SL326P-201ENST00000477493 296 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC080014.1-201ENST00000496877 1201 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 NPM1P27-201ENST00000502784 830 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC011352.3-201ENST00000505162 593 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 HMGB3P13-201ENST00000511263 607 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC3P19447 HNRNPKP5-201ENST00000515300 253 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 RN7SKP238-201ENST00000516483 249 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 RNA5SP340-201ENST00000517132 107 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC060775.1-201ENST00000518241 520 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC3P19447 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
ERCC3P19447 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC3P19447 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.27□□□□□ -1.25
ERCC3P19447 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC3P19447 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC3P19447 OR4K7P-201ENST00000580232 945 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 MIR4420-201ENST00000583944 77 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 NTAN1P1-201ENST00000603150 646 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC090425.2-201ENST00000608818 501 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.27□□□□□ -1.25
ERCC3P19447 AC009163.6-201ENST00000612367 342 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC023158.2-201ENST00000614876 543 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AL031658.2-201ENST00000616850 651 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 AC129915.3-201ENST00000634128 948 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 MIR193BHG-214ENST00000641765 509 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
ERCC3P19447 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 AC013488.1-201ENST00000526618 1838 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 AL133243.2-201ENST00000610331 1621 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC3P19447 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
ERCC3P19447 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.27□□□□□ -1.25
ERCC3P19447 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.27□□□□□ -1.25
ERCC3P19447 EIF3EP1-201ENST00000433978 1316 ntBASIC7.27□□□□□ -1.25
ERCC3P19447 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
ERCC3P19447 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 AC022034.1-201ENST00000512867 2156 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC3P19447 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
ERCC3P19447 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 AC023490.2-201ENST00000359859 470 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC3P19447 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
ERCC3P19447 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC3P19447 AC234782.4-201ENST00000417646 1048 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC3P19447 CYCSP52-201ENST00000422857 310 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 RPL7P44-201ENST00000424827 742 ntBASIC7.26□□□□□ -1.25
ERCC3P19447 MGAT2P2-201ENST00000427194 797 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms